Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
RIMBP3Q9UFD9 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 AL021578.1-201ENST00000613646 709 ntBASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 AC093010.1-201ENST00000473625 1624 ntBASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 BTBD7P1-201ENST00000447253 1453 ntBASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 CENPM-206ENST00000407253 818 ntTSL 2 BASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 ELK1P1-201ENST00000485699 580 ntBASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 CTBP2P3-201ENST00000585629 1255 ntBASIC27.41■■□□□ 1.98
RIMBP3Q9UFD9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
RIMBP3Q9UFD9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RIMBP3Q9UFD9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
RIMBP3Q9UFD9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RIMBP3Q9UFD9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC27.4■■□□□ 1.98
RIMBP3Q9UFD9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RIMBP3Q9UFD9 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC27.4■■□□□ 1.98
RIMBP3Q9UFD9 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RIMBP3Q9UFD9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
RIMBP3Q9UFD9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC27.4■■□□□ 1.98
RIMBP3Q9UFD9 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RIMBP3Q9UFD9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC27.4■■□□□ 1.98
RIMBP3Q9UFD9 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC27.4■■□□□ 1.98
RIMBP3Q9UFD9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RIMBP3Q9UFD9 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
RIMBP3Q9UFD9 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RIMBP3Q9UFD9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC27.39■■□□□ 1.98
RIMBP3Q9UFD9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC27.39■■□□□ 1.98
RIMBP3Q9UFD9 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RIMBP3Q9UFD9 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RIMBP3Q9UFD9 STX1A-203ENST00000395155 783 ntTSL 2 BASIC27.39■■□□□ 1.98
RIMBP3Q9UFD9 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
RIMBP3Q9UFD9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RIMBP3Q9UFD9 RPL37AP1-201ENST00000412502 279 ntBASIC27.39■■□□□ 1.98
RIMBP3Q9UFD9 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC27.39■■□□□ 1.98
RIMBP3Q9UFD9 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
RIMBP3Q9UFD9 IGHJ2P-201ENST00000454480 60 ntBASIC27.39■■□□□ 1.98
RIMBP3Q9UFD9 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC27.39■■□□□ 1.98
RIMBP3Q9UFD9 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC27.39■■□□□ 1.98
RIMBP3Q9UFD9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RIMBP3Q9UFD9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC27.39■■□□□ 1.98
RIMBP3Q9UFD9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC27.39■■□□□ 1.97
RIMBP3Q9UFD9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC27.39■■□□□ 1.97
RIMBP3Q9UFD9 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC27.39■■□□□ 1.97
RIMBP3Q9UFD9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
RIMBP3Q9UFD9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.97
RIMBP3Q9UFD9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.97
RIMBP3Q9UFD9 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 NARF-206ENST00000457415 1668 ntTSL 5 BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 IGHV3-52-201ENST00000519770 353 ntBASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 NEU3-203ENST00000529024 581 ntTSL 3 BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 AP3S2-216ENST00000617003 1561 ntBASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 RPS15-212ENST00000593052 629 ntTSL 2 BASIC27.38■■□□□ 1.97
RIMBP3Q9UFD9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 CETN4P-206ENST00000642099 2168 ntBASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms