Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 AL031284.1-201ENST00000419297 478 ntBASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 SCARNA2-201ENST00000458748 420 ntBASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 AC122714.2-201ENST00000502787 707 ntBASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIP2Q9UDT6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 COX5BP2-201ENST00000392354 334 ntBASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 AC073648.2-201ENST00000510116 352 ntBASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLIP2Q9UDT6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLIP2Q9UDT6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLIP2Q9UDT6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLIP2Q9UDT6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.77■□□□□ 0.91
CLIP2Q9UDT6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.77■□□□□ 0.91
CLIP2Q9UDT6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
CLIP2Q9UDT6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLIP2Q9UDT6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 AL356309.3-201ENST00000624132 1934 ntBASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 HNRNPDP1-201ENST00000439535 754 ntBASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 AC018712.1-201ENST00000455767 687 ntBASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLIP2Q9UDT6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 SIRPAP1-201ENST00000448467 1770 ntBASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 AC021087.4-201ENST00000563761 564 ntBASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms