Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.82■□□□□ 0.6
CNTN3Q9P232 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNTN3Q9P232 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNTN3Q9P232 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.82■□□□□ 0.6
CNTN3Q9P232 MIR574-201ENST00000385209 96 ntBASIC18.82■□□□□ 0.6
CNTN3Q9P232 ELK2BP-201ENST00000415014 1224 ntBASIC18.82■□□□□ 0.6
CNTN3Q9P232 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.82■□□□□ 0.6
CNTN3Q9P232 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.82■□□□□ 0.6
CNTN3Q9P232 RNA5SP415-201ENST00000517246 115 ntBASIC18.82■□□□□ 0.6
CNTN3Q9P232 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.82■□□□□ 0.6
CNTN3Q9P232 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CNTN3Q9P232 MIR1199-201ENST00000621445 119 ntBASIC18.82■□□□□ 0.6
CNTN3Q9P232 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CNTN3Q9P232 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNTN3Q9P232 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNTN3Q9P232 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNTN3Q9P232 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.82■□□□□ 0.6
CNTN3Q9P232 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNTN3Q9P232 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNTN3Q9P232 AC104109.2-201ENST00000602919 1418 ntBASIC18.82■□□□□ 0.6
CNTN3Q9P232 LTB4R2-202ENST00000528054 3092 ntBASIC18.82■□□□□ 0.6
CNTN3Q9P232 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CNTN3Q9P232 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 AC006504.4-201ENST00000592118 1568 ntBASIC18.81■□□□□ 0.6
CNTN3Q9P232 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.81■□□□□ 0.6
CNTN3Q9P232 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.81■□□□□ 0.6
CNTN3Q9P232 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 AL355312.1-201ENST00000407115 2176 ntBASIC18.81■□□□□ 0.6
CNTN3Q9P232 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.81■□□□□ 0.6
CNTN3Q9P232 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.81■□□□□ 0.6
CNTN3Q9P232 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 PMS2P1-201ENST00000431037 1228 ntBASIC18.81■□□□□ 0.6
CNTN3Q9P232 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.81■□□□□ 0.6
CNTN3Q9P232 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.81■□□□□ 0.6
CNTN3Q9P232 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.81■□□□□ 0.6
CNTN3Q9P232 PGM5P2-202ENST00000637225 1043 ntBASIC18.81■□□□□ 0.6
CNTN3Q9P232 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CNTN3Q9P232 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.81■□□□□ 0.6
CNTN3Q9P232 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.81■□□□□ 0.6
CNTN3Q9P232 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CNTN3Q9P232 ZNF259P1-201ENST00000407656 1365 ntBASIC18.81■□□□□ 0.6
CNTN3Q9P232 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNTN3Q9P232 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.8■□□□□ 0.6
CNTN3Q9P232 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNTN3Q9P232 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.8■□□□□ 0.6
CNTN3Q9P232 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.8■□□□□ 0.6
CNTN3Q9P232 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CNTN3Q9P232 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNTN3Q9P232 AC133963.1-201ENST00000504166 1679 ntBASIC18.8■□□□□ 0.6
CNTN3Q9P232 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.8■□□□□ 0.6
CNTN3Q9P232 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.8■□□□□ 0.6
CNTN3Q9P232 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNTN3Q9P232 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNTN3Q9P232 LINC00982-205ENST00000420957 435 ntBASIC18.8■□□□□ 0.6
CNTN3Q9P232 UNC93B6-202ENST00000528242 690 ntBASIC18.8■□□□□ 0.6
CNTN3Q9P232 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNTN3Q9P232 AC034105.1-201ENST00000563488 319 ntBASIC18.8■□□□□ 0.6
CNTN3Q9P232 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.8■□□□□ 0.6
CNTN3Q9P232 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNTN3Q9P232 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNTN3Q9P232 AL353135.1-201ENST00000606729 504 ntBASIC18.8■□□□□ 0.6
CNTN3Q9P232 Z83851.2-201ENST00000609564 659 ntBASIC18.8■□□□□ 0.6
CNTN3Q9P232 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.8■□□□□ 0.6
CNTN3Q9P232 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CNTN3Q9P232 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNTN3Q9P232 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.8■□□□□ 0.6
CNTN3Q9P232 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CNTN3Q9P232 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNTN3Q9P232 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNTN3Q9P232 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNTN3Q9P232 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.79■□□□□ 0.6
CNTN3Q9P232 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.79■□□□□ 0.6
CNTN3Q9P232 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CNTN3Q9P232 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNTN3Q9P232 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNTN3Q9P232 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CNTN3Q9P232 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
CNTN3Q9P232 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNTN3Q9P232 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNTN3Q9P232 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CNTN3Q9P232 ACTG1P4-201ENST00000425123 1122 ntBASIC18.79■□□□□ 0.6
CNTN3Q9P232 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.79■□□□□ 0.6
CNTN3Q9P232 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms