Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 DDX43P3-201ENST00000441064 443 ntBASIC16.35■□□□□ 0.21
RLIMQ9NVW2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 TMPOP1-202ENST00000424642 1267 ntBASIC16.34■□□□□ 0.21
RLIMQ9NVW2 AL671277.2-201ENST00000458060 996 ntBASIC16.34■□□□□ 0.21
RLIMQ9NVW2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.34■□□□□ 0.21
RLIMQ9NVW2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.34■□□□□ 0.21
RLIMQ9NVW2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RLIMQ9NVW2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.33■□□□□ 0.21
RLIMQ9NVW2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RLIMQ9NVW2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
RLIMQ9NVW2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.33■□□□□ 0.21
RLIMQ9NVW2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RLIMQ9NVW2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
RLIMQ9NVW2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 LINC01451-201ENST00000623792 534 ntBASIC16.33■□□□□ 0.2
RLIMQ9NVW2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RLIMQ9NVW2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RLIMQ9NVW2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms