Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 AC004951.3-201ENST00000418645 1148 ntBASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 AC004980.1-204ENST00000429707 299 ntBASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 AL445675.2-201ENST00000620291 557 ntBASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 AC006449.5-201ENST00000610658 2098 ntBASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 POM121L13P-201ENST00000422362 380 ntBASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 DUTP2-201ENST00000519164 463 ntBASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 MYC-209ENST00000641252 345 ntBASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 AC007950.2-201ENST00000615045 2347 ntBASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.36□□□□□ -0.11
SMIM3Q9BZL3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms