Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 INTS4P1-201ENST00000438455 1935 ntBASIC12.23□□□□□ -0.45
UPK3BQ9BT76 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.22□□□□□ -0.45
UPK3BQ9BT76 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 RBM17P3-201ENST00000417687 1192 ntBASIC12.22□□□□□ -0.45
UPK3BQ9BT76 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 EMBP1-201ENST00000458200 901 ntBASIC12.22□□□□□ -0.45
UPK3BQ9BT76 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 AL121912.1-201ENST00000603683 238 ntBASIC12.22□□□□□ -0.45
UPK3BQ9BT76 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK3BQ9BT76 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 AC093677.2-201ENST00000600169 1863 ntBASIC12.21□□□□□ -0.45
UPK3BQ9BT76 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 AKR1C7P-201ENST00000305623 895 ntBASIC12.21□□□□□ -0.45
UPK3BQ9BT76 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 FAM220CP-201ENST00000395253 831 ntBASIC12.21□□□□□ -0.45
UPK3BQ9BT76 RCN1P2-201ENST00000398357 915 ntBASIC12.21□□□□□ -0.45
UPK3BQ9BT76 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 AL160237.2-201ENST00000556165 472 ntBASIC12.21□□□□□ -0.45
UPK3BQ9BT76 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 CEP83-AS1-201ENST00000623122 2482 ntBASIC12.21□□□□□ -0.45
UPK3BQ9BT76 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC12.21□□□□□ -0.45
UPK3BQ9BT76 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
UPK3BQ9BT76 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms