Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LIMD2Q9BT23 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LIMD2Q9BT23 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LIMD2Q9BT23 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LIMD2Q9BT23 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC10.49□□□□□ -0.73
LIMD2Q9BT23 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC10.49□□□□□ -0.73
LIMD2Q9BT23 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 AL096828.2-201ENST00000567259 1965 ntBASIC10.48□□□□□ -0.73
LIMD2Q9BT23 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 REXO1L9P-201ENST00000604264 2108 ntBASIC10.48□□□□□ -0.73
LIMD2Q9BT23 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 Telomerase-vert.1-201ENST00000363312 438 ntBASIC10.48□□□□□ -0.73
LIMD2Q9BT23 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 PVRIG2P-201ENST00000435460 978 ntBASIC10.48□□□□□ -0.73
LIMD2Q9BT23 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 SEC1P-202ENST00000473944 940 ntBASIC10.48□□□□□ -0.73
LIMD2Q9BT23 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 AC141257.4-201ENST00000634557 245 ntBASIC10.48□□□□□ -0.73
LIMD2Q9BT23 AC136944.6-201ENST00000634818 245 ntBASIC10.48□□□□□ -0.73
LIMD2Q9BT23 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 GNAS-203ENST00000306120 1878 ntBASIC10.48□□□□□ -0.73
LIMD2Q9BT23 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 PBK-203ENST00000522944 1499 ntTSL 2 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
LIMD2Q9BT23 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 AC087499.1-201ENST00000418141 1075 ntBASIC10.47□□□□□ -0.73
LIMD2Q9BT23 SLC25A3P1-201ENST00000443844 931 ntBASIC10.47□□□□□ -0.73
LIMD2Q9BT23 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC10.47□□□□□ -0.73
LIMD2Q9BT23 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms