Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 FAM185BP-201ENST00000443595 716 ntBASIC18.51■□□□□ 0.55
ZNF558Q96NG5 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 AC046185.3-201ENST00000623228 1824 ntBASIC18.51■□□□□ 0.55
ZNF558Q96NG5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF558Q96NG5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 MIR3197-201ENST00000582241 73 ntBASIC18.5■□□□□ 0.55
ZNF558Q96NG5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 AC093028.1-201ENST00000622998 982 ntBASIC18.5■□□□□ 0.55
ZNF558Q96NG5 AL513210.1-201ENST00000629608 234 ntBASIC18.5■□□□□ 0.55
ZNF558Q96NG5 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ZNF558Q96NG5 AL135999.2-201ENST00000622438 1686 ntBASIC18.5■□□□□ 0.55
ZNF558Q96NG5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 AL513480.1-201ENST00000451731 511 ntBASIC18.49■□□□□ 0.55
ZNF558Q96NG5 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 REXO1L3P-201ENST00000622202 1288 ntBASIC18.49■□□□□ 0.55
ZNF558Q96NG5 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF558Q96NG5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms