Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPDL1Q96EA4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.35■□□□□ 0.37
SPDL1Q96EA4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.35■□□□□ 0.37
SPDL1Q96EA4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPDL1Q96EA4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.35■□□□□ 0.37
SPDL1Q96EA4 AC097488.1-201ENST00000507834 756 ntBASIC17.35■□□□□ 0.37
SPDL1Q96EA4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.35■□□□□ 0.37
SPDL1Q96EA4 CD177P1-201ENST00000606252 935 ntBASIC17.35■□□□□ 0.37
SPDL1Q96EA4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPDL1Q96EA4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.35■□□□□ 0.37
SPDL1Q96EA4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPDL1Q96EA4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SPDL1Q96EA4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.35■□□□□ 0.37
SPDL1Q96EA4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.35■□□□□ 0.37
SPDL1Q96EA4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPDL1Q96EA4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPDL1Q96EA4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.35■□□□□ 0.37
SPDL1Q96EA4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 KRT18P23-201ENST00000435622 1283 ntBASIC17.34■□□□□ 0.37
SPDL1Q96EA4 AC116562.2-201ENST00000507042 360 ntBASIC17.34■□□□□ 0.37
SPDL1Q96EA4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 KRT8P7-201ENST00000533003 1432 ntBASIC17.34■□□□□ 0.37
SPDL1Q96EA4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPDL1Q96EA4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SPDL1Q96EA4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.33■□□□□ 0.37
SPDL1Q96EA4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SPDL1Q96EA4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SPDL1Q96EA4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SPDL1Q96EA4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SPDL1Q96EA4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SPDL1Q96EA4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SPDL1Q96EA4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SPDL1Q96EA4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SPDL1Q96EA4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
SPDL1Q96EA4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SPDL1Q96EA4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SPDL1Q96EA4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPDL1Q96EA4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.33■□□□□ 0.36
SPDL1Q96EA4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPDL1Q96EA4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPDL1Q96EA4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SPDL1Q96EA4 AGGF1P2-201ENST00000426656 2106 ntBASIC17.33■□□□□ 0.36
SPDL1Q96EA4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SPDL1Q96EA4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPDL1Q96EA4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SPDL1Q96EA4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPDL1Q96EA4 AC106886.4-201ENST00000623557 2502 ntBASIC17.32■□□□□ 0.36
SPDL1Q96EA4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.32■□□□□ 0.36
SPDL1Q96EA4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 FAM197Y4-202ENST00000622692 608 ntBASIC17.32■□□□□ 0.36
SPDL1Q96EA4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.32■□□□□ 0.36
SPDL1Q96EA4 AL355312.1-201ENST00000407115 2176 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms