Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HPS1Q92902 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
HPS1Q92902 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.1■□□□□ 0.17
HPS1Q92902 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
HPS1Q92902 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 TSPY17P-201ENST00000450329 467 ntBASIC16.1■□□□□ 0.17
HPS1Q92902 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.1■□□□□ 0.17
HPS1Q92902 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 CKBP1-201ENST00000565489 1086 ntBASIC16.1■□□□□ 0.17
HPS1Q92902 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.1■□□□□ 0.17
HPS1Q92902 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.1■□□□□ 0.17
HPS1Q92902 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.1■□□□□ 0.17
HPS1Q92902 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.1■□□□□ 0.17
HPS1Q92902 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HPS1Q92902 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HPS1Q92902 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HPS1Q92902 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.1■□□□□ 0.17
HPS1Q92902 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HPS1Q92902 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HPS1Q92902 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS1Q92902 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HPS1Q92902 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.09■□□□□ 0.17
HPS1Q92902 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.09■□□□□ 0.17
HPS1Q92902 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.09■□□□□ 0.17
HPS1Q92902 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HPS1Q92902 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HPS1Q92902 TSPY23P-201ENST00000440136 739 ntBASIC16.09■□□□□ 0.17
HPS1Q92902 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC16.09■□□□□ 0.17
HPS1Q92902 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.09■□□□□ 0.17
HPS1Q92902 AC087388.1-201ENST00000571370 1112 ntBASIC16.09■□□□□ 0.17
HPS1Q92902 RN7SL602P-201ENST00000578326 324 ntBASIC16.09■□□□□ 0.17
HPS1Q92902 NTF6B-201ENST00000591913 560 ntBASIC16.09■□□□□ 0.17
HPS1Q92902 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.09■□□□□ 0.17
HPS1Q92902 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS1Q92902 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS1Q92902 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS1Q92902 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.09■□□□□ 0.17
HPS1Q92902 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS1Q92902 KRT8P11-201ENST00000409686 1436 ntBASIC16.09■□□□□ 0.17
HPS1Q92902 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
HPS1Q92902 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS1Q92902 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HPS1Q92902 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS1Q92902 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS1Q92902 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS1Q92902 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS1Q92902 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS1Q92902 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.09■□□□□ 0.17
HPS1Q92902 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.09■□□□□ 0.17
HPS1Q92902 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS1Q92902 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.17
HPS1Q92902 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.08■□□□□ 0.17
HPS1Q92902 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.08■□□□□ 0.17
HPS1Q92902 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
HPS1Q92902 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
HPS1Q92902 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
HPS1Q92902 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
HPS1Q92902 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HPS1Q92902 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HPS1Q92902 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
HPS1Q92902 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HPS1Q92902 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HPS1Q92902 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HPS1Q92902 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HPS1Q92902 AK4P3-201ENST00000418260 669 ntBASIC16.08■□□□□ 0.16
HPS1Q92902 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
HPS1Q92902 AC008040.2-201ENST00000461049 708 ntBASIC16.08■□□□□ 0.16
HPS1Q92902 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC16.08■□□□□ 0.16
HPS1Q92902 CA15P1-201ENST00000481698 905 ntBASIC16.08■□□□□ 0.16
HPS1Q92902 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
HPS1Q92902 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
HPS1Q92902 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.08■□□□□ 0.16
HPS1Q92902 AC006011.2-201ENST00000621313 1158 ntBASIC16.08■□□□□ 0.16
HPS1Q92902 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.08■□□□□ 0.16
HPS1Q92902 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HPS1Q92902 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HPS1Q92902 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HPS1Q92902 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
HPS1Q92902 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HPS1Q92902 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.08■□□□□ 0.16
HPS1Q92902 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
HPS1Q92902 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.08■□□□□ 0.16
HPS1Q92902 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HPS1Q92902 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HPS1Q92902 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
HPS1Q92902 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HPS1Q92902 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms