Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP6NLQ92738 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.73■□□□□ 0.75
USP6NLQ92738 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP6NLQ92738 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP6NLQ92738 AC093520.2-201ENST00000561830 333 ntBASIC19.73■□□□□ 0.75
USP6NLQ92738 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.73■□□□□ 0.75
USP6NLQ92738 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.73■□□□□ 0.75
USP6NLQ92738 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP6NLQ92738 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP6NLQ92738 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP6NLQ92738 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.73■□□□□ 0.75
USP6NLQ92738 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
USP6NLQ92738 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.72■□□□□ 0.75
USP6NLQ92738 AC120498.9-201ENST00000339021 3867 ntBASIC19.72■□□□□ 0.75
USP6NLQ92738 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6NLQ92738 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6NLQ92738 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6NLQ92738 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.72■□□□□ 0.75
USP6NLQ92738 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6NLQ92738 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP6NLQ92738 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
USP6NLQ92738 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP6NLQ92738 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
USP6NLQ92738 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6NLQ92738 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6NLQ92738 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6NLQ92738 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP6NLQ92738 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6NLQ92738 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.72■□□□□ 0.75
USP6NLQ92738 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.72■□□□□ 0.75
USP6NLQ92738 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.72■□□□□ 0.75
USP6NLQ92738 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
USP6NLQ92738 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6NLQ92738 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.72■□□□□ 0.75
USP6NLQ92738 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
USP6NLQ92738 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.72■□□□□ 0.75
USP6NLQ92738 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.72■□□□□ 0.75
USP6NLQ92738 AC015911.4-201ENST00000588022 1070 ntBASIC19.72■□□□□ 0.75
USP6NLQ92738 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.72■□□□□ 0.75
USP6NLQ92738 LINC00628-201ENST00000628516 1289 ntBASIC19.72■□□□□ 0.75
USP6NLQ92738 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
USP6NLQ92738 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.72■□□□□ 0.75
USP6NLQ92738 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
USP6NLQ92738 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.72■□□□□ 0.75
USP6NLQ92738 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.72■□□□□ 0.75
USP6NLQ92738 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6NLQ92738 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6NLQ92738 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP6NLQ92738 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.71■□□□□ 0.75
USP6NLQ92738 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP6NLQ92738 MYCLP1-201ENST00000372451 1075 ntBASIC19.71■□□□□ 0.75
USP6NLQ92738 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
USP6NLQ92738 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.71■□□□□ 0.75
USP6NLQ92738 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP6NLQ92738 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.71■□□□□ 0.75
USP6NLQ92738 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.71■□□□□ 0.75
USP6NLQ92738 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP6NLQ92738 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.71■□□□□ 0.75
USP6NLQ92738 AC239800.4-201ENST00000603712 296 ntBASIC19.71■□□□□ 0.75
USP6NLQ92738 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
USP6NLQ92738 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.71■□□□□ 0.75
USP6NLQ92738 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP6NLQ92738 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP6NLQ92738 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP6NLQ92738 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP6NLQ92738 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP6NLQ92738 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP6NLQ92738 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
USP6NLQ92738 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP6NLQ92738 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP6NLQ92738 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6NLQ92738 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
USP6NLQ92738 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6NLQ92738 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
USP6NLQ92738 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.7■□□□□ 0.74
USP6NLQ92738 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6NLQ92738 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP6NLQ92738 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.7■□□□□ 0.74
USP6NLQ92738 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.7■□□□□ 0.74
USP6NLQ92738 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.7■□□□□ 0.74
USP6NLQ92738 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6NLQ92738 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
USP6NLQ92738 AL390955.2-201ENST00000603032 514 ntBASIC19.7■□□□□ 0.74
USP6NLQ92738 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.7■□□□□ 0.74
USP6NLQ92738 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.7■□□□□ 0.74
USP6NLQ92738 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
USP6NLQ92738 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6NLQ92738 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
USP6NLQ92738 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6NLQ92738 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6NLQ92738 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP6NLQ92738 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6NLQ92738 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6NLQ92738 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
USP6NLQ92738 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6NLQ92738 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP6NLQ92738 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP6NLQ92738 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6NLQ92738 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6NLQ92738 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms