Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF4Q92544 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TM9SF4Q92544 RNA5SP419-201ENST00000515908 135 ntBASIC16.57■□□□□ 0.24
TM9SF4Q92544 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.57■□□□□ 0.24
TM9SF4Q92544 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.57■□□□□ 0.24
TM9SF4Q92544 AC139887.3-201ENST00000568585 713 ntBASIC16.57■□□□□ 0.24
TM9SF4Q92544 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.57■□□□□ 0.24
TM9SF4Q92544 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.57■□□□□ 0.24
TM9SF4Q92544 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.57■□□□□ 0.24
TM9SF4Q92544 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.57■□□□□ 0.24
TM9SF4Q92544 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF4Q92544 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF4Q92544 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF4Q92544 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF4Q92544 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF4Q92544 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF4Q92544 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF4Q92544 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF4Q92544 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TM9SF4Q92544 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TM9SF4Q92544 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF4Q92544 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF4Q92544 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.56■□□□□ 0.24
TM9SF4Q92544 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TM9SF4Q92544 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.56■□□□□ 0.24
TM9SF4Q92544 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF4Q92544 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF4Q92544 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
TM9SF4Q92544 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF4Q92544 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
TM9SF4Q92544 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.56■□□□□ 0.24
TM9SF4Q92544 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TM9SF4Q92544 KRT18P65-201ENST00000439811 1286 ntBASIC16.56■□□□□ 0.24
TM9SF4Q92544 AC018712.1-201ENST00000455767 687 ntBASIC16.56■□□□□ 0.24
TM9SF4Q92544 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.56■□□□□ 0.24
TM9SF4Q92544 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.56■□□□□ 0.24
TM9SF4Q92544 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.56■□□□□ 0.24
TM9SF4Q92544 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF4Q92544 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.56■□□□□ 0.24
TM9SF4Q92544 AC005336.2-201ENST00000593183 939 ntBASIC16.56■□□□□ 0.24
TM9SF4Q92544 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.56■□□□□ 0.24
TM9SF4Q92544 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.56■□□□□ 0.24
TM9SF4Q92544 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.56■□□□□ 0.24
TM9SF4Q92544 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF4Q92544 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF4Q92544 SDHAP2-201ENST00000455183 2001 ntBASIC16.56■□□□□ 0.24
TM9SF4Q92544 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF4Q92544 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TM9SF4Q92544 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF4Q92544 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF4Q92544 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF4Q92544 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF4Q92544 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF4Q92544 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.56■□□□□ 0.24
TM9SF4Q92544 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF4Q92544 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF4Q92544 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF4Q92544 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF4Q92544 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF4Q92544 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF4Q92544 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF4Q92544 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF4Q92544 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 AL024508.2-201ENST00000607749 1894 ntBASIC16.55■□□□□ 0.24
TM9SF4Q92544 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF4Q92544 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF4Q92544 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF4Q92544 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF4Q92544 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF4Q92544 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 FGFR3P6-201ENST00000457012 610 ntBASIC16.55■□□□□ 0.24
TM9SF4Q92544 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF4Q92544 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 AC011467.2-201ENST00000598425 242 ntBASIC16.55■□□□□ 0.24
TM9SF4Q92544 AL138831.2-201ENST00000606564 490 ntBASIC16.55■□□□□ 0.24
TM9SF4Q92544 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF4Q92544 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF4Q92544 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF4Q92544 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF4Q92544 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TM9SF4Q92544 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF4Q92544 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms