Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSMEM1Q8WWF3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSMEM1Q8WWF3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
SSMEM1Q8WWF3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSMEM1Q8WWF3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSMEM1Q8WWF3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSMEM1Q8WWF3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSMEM1Q8WWF3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSMEM1Q8WWF3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SSMEM1Q8WWF3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSMEM1Q8WWF3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSMEM1Q8WWF3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SSMEM1Q8WWF3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSMEM1Q8WWF3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSMEM1Q8WWF3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SSMEM1Q8WWF3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 AP005901.3-202ENST00000581653 237 ntBASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 AL121912.1-201ENST00000603683 238 ntBASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSMEM1Q8WWF3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 PRORSD1P-202ENST00000563365 2154 ntBASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 AC099398.1-201ENST00000567919 2776 ntBASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 AC064862.7-201ENST00000604520 867 ntBASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 AC009154.2-201ENST00000621177 724 ntBASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSMEM1Q8WWF3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms