Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC27.16■■□□□ 1.94
CFAP43Q8NDM7 AL121761.2-201ENST00000598007 1648 ntBASIC27.16■■□□□ 1.94
CFAP43Q8NDM7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
CFAP43Q8NDM7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
CFAP43Q8NDM7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CFAP43Q8NDM7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
CFAP43Q8NDM7 HLA-DRB6-201ENST00000411500 1235 ntBASIC27.15■■□□□ 1.94
CFAP43Q8NDM7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
CFAP43Q8NDM7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC27.15■■□□□ 1.94
CFAP43Q8NDM7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CFAP43Q8NDM7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CFAP43Q8NDM7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CFAP43Q8NDM7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC27.15■■□□□ 1.94
CFAP43Q8NDM7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CFAP43Q8NDM7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC27.15■■□□□ 1.94
CFAP43Q8NDM7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CFAP43Q8NDM7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC27.15■■□□□ 1.94
CFAP43Q8NDM7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CFAP43Q8NDM7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC27.15■■□□□ 1.94
CFAP43Q8NDM7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC27.14■■□□□ 1.94
CFAP43Q8NDM7 GAPDHP21-201ENST00000450301 1010 ntBASIC27.14■■□□□ 1.94
CFAP43Q8NDM7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
CFAP43Q8NDM7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CFAP43Q8NDM7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC27.14■■□□□ 1.94
CFAP43Q8NDM7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CFAP43Q8NDM7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CFAP43Q8NDM7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC27.14■■□□□ 1.94
CFAP43Q8NDM7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
CFAP43Q8NDM7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.93
CFAP43Q8NDM7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC27.14■■□□□ 1.93
CFAP43Q8NDM7 AL590787.1-201ENST00000568856 1315 ntBASIC27.14■■□□□ 1.93
CFAP43Q8NDM7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
CFAP43Q8NDM7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
CFAP43Q8NDM7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC27.14■■□□□ 1.93
CFAP43Q8NDM7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CFAP43Q8NDM7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CFAP43Q8NDM7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC27.13■■□□□ 1.93
CFAP43Q8NDM7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
CFAP43Q8NDM7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CFAP43Q8NDM7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CFAP43Q8NDM7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CFAP43Q8NDM7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
CFAP43Q8NDM7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
CFAP43Q8NDM7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC27.13■■□□□ 1.93
CFAP43Q8NDM7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC27.13■■□□□ 1.93
CFAP43Q8NDM7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC27.13■■□□□ 1.93
CFAP43Q8NDM7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CFAP43Q8NDM7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
CFAP43Q8NDM7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC27.13■■□□□ 1.93
CFAP43Q8NDM7 AC135050.7-201ENST00000624508 2218 ntBASIC27.13■■□□□ 1.93
CFAP43Q8NDM7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
CFAP43Q8NDM7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CFAP43Q8NDM7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC27.12■■□□□ 1.93
CFAP43Q8NDM7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC27.12■■□□□ 1.93
CFAP43Q8NDM7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
CFAP43Q8NDM7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC27.12■■□□□ 1.93
CFAP43Q8NDM7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CFAP43Q8NDM7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC27.12■■□□□ 1.93
CFAP43Q8NDM7 AC046185.3-201ENST00000623228 1824 ntBASIC27.12■■□□□ 1.93
CFAP43Q8NDM7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
CFAP43Q8NDM7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CFAP43Q8NDM7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC27.12■■□□□ 1.93
CFAP43Q8NDM7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
CFAP43Q8NDM7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
CFAP43Q8NDM7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC27.12■■□□□ 1.93
CFAP43Q8NDM7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CFAP43Q8NDM7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
CFAP43Q8NDM7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CFAP43Q8NDM7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC27.12■■□□□ 1.93
CFAP43Q8NDM7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CFAP43Q8NDM7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CFAP43Q8NDM7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
CFAP43Q8NDM7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CFAP43Q8NDM7 FAM207CP-201ENST00000443486 507 ntBASIC27.11■■□□□ 1.93
CFAP43Q8NDM7 RNA5SP421-201ENST00000516864 134 ntBASIC27.11■■□□□ 1.93
CFAP43Q8NDM7 AC099522.2-201ENST00000607001 744 ntBASIC27.11■■□□□ 1.93
CFAP43Q8NDM7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC27.11■■□□□ 1.93
CFAP43Q8NDM7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC27.11■■□□□ 1.93
CFAP43Q8NDM7 AC092919.2-201ENST00000623631 1645 ntBASIC27.11■■□□□ 1.93
CFAP43Q8NDM7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CFAP43Q8NDM7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC27.11■■□□□ 1.93
CFAP43Q8NDM7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC27.11■■□□□ 1.93
CFAP43Q8NDM7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC27.11■■□□□ 1.93
CFAP43Q8NDM7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC27.11■■□□□ 1.93
CFAP43Q8NDM7 REXO1L3P-201ENST00000622202 1288 ntBASIC27.11■■□□□ 1.93
CFAP43Q8NDM7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CFAP43Q8NDM7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CFAP43Q8NDM7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC27.1■■□□□ 1.93
CFAP43Q8NDM7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
CFAP43Q8NDM7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CFAP43Q8NDM7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
CFAP43Q8NDM7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC27.1■■□□□ 1.93
CFAP43Q8NDM7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC27.1■■□□□ 1.93
CFAP43Q8NDM7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC27.1■■□□□ 1.93
CFAP43Q8NDM7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC27.1■■□□□ 1.93
CFAP43Q8NDM7 DUX4L17-201ENST00000557360 1267 ntBASIC27.1■■□□□ 1.93
CFAP43Q8NDM7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC27.1■■□□□ 1.93
CFAP43Q8NDM7 RN7SL204P-201ENST00000582831 262 ntBASIC27.1■■□□□ 1.93
CFAP43Q8NDM7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC27.1■■□□□ 1.93
CFAP43Q8NDM7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms