Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHPFQ8IZ52 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHPFQ8IZ52 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.83■□□□□ 0.45
CHPFQ8IZ52 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CHPFQ8IZ52 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHPFQ8IZ52 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.83■□□□□ 0.45
CHPFQ8IZ52 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CHPFQ8IZ52 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.83■□□□□ 0.45
CHPFQ8IZ52 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHPFQ8IZ52 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CHPFQ8IZ52 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CHPFQ8IZ52 AC003669.1-201ENST00000334569 611 ntBASIC17.83■□□□□ 0.44
CHPFQ8IZ52 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.83■□□□□ 0.44
CHPFQ8IZ52 AC005104.2-201ENST00000427818 678 ntBASIC17.83■□□□□ 0.44
CHPFQ8IZ52 AC108751.1-201ENST00000490852 363 ntBASIC17.83■□□□□ 0.44
CHPFQ8IZ52 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHPFQ8IZ52 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.83■□□□□ 0.44
CHPFQ8IZ52 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.83■□□□□ 0.44
CHPFQ8IZ52 AC010327.4-202ENST00000591484 748 ntBASIC17.83■□□□□ 0.44
CHPFQ8IZ52 AL139424.1-201ENST00000607572 797 ntBASIC17.83■□□□□ 0.44
CHPFQ8IZ52 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.83■□□□□ 0.44
CHPFQ8IZ52 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.83■□□□□ 0.44
CHPFQ8IZ52 AC009949.1-201ENST00000623048 1830 ntBASIC17.83■□□□□ 0.44
CHPFQ8IZ52 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHPFQ8IZ52 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHPFQ8IZ52 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHPFQ8IZ52 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHPFQ8IZ52 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHPFQ8IZ52 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
CHPFQ8IZ52 AC148477.5-201ENST00000625164 1645 ntBASIC17.83■□□□□ 0.44
CHPFQ8IZ52 REXO1L9P-201ENST00000604264 2108 ntBASIC17.83■□□□□ 0.44
CHPFQ8IZ52 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHPFQ8IZ52 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHPFQ8IZ52 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.83■□□□□ 0.44
CHPFQ8IZ52 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHPFQ8IZ52 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 SIGLEC30P-201ENST00000455569 941 ntBASIC17.82■□□□□ 0.44
CHPFQ8IZ52 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 AC109462.3-201ENST00000573934 613 ntBASIC17.82■□□□□ 0.44
CHPFQ8IZ52 MIR3687-2-201ENST00000577708 61 ntBASIC17.82■□□□□ 0.44
CHPFQ8IZ52 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 MIR3687-1-201ENST00000614492 61 ntBASIC17.82■□□□□ 0.44
CHPFQ8IZ52 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 BX276092.7-203ENST00000637198 1536 ntBASIC17.82■□□□□ 0.44
CHPFQ8IZ52 AC068880.1-201ENST00000507289 2297 ntBASIC17.82■□□□□ 0.44
CHPFQ8IZ52 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHPFQ8IZ52 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHPFQ8IZ52 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.81■□□□□ 0.44
CHPFQ8IZ52 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHPFQ8IZ52 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.81■□□□□ 0.44
CHPFQ8IZ52 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHPFQ8IZ52 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.81■□□□□ 0.44
CHPFQ8IZ52 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHPFQ8IZ52 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.81■□□□□ 0.44
CHPFQ8IZ52 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHPFQ8IZ52 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHPFQ8IZ52 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.81■□□□□ 0.44
CHPFQ8IZ52 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHPFQ8IZ52 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHPFQ8IZ52 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHPFQ8IZ52 UPF3AP3-201ENST00000420996 769 ntBASIC17.81■□□□□ 0.44
CHPFQ8IZ52 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.81■□□□□ 0.44
CHPFQ8IZ52 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.81■□□□□ 0.44
CHPFQ8IZ52 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.81■□□□□ 0.44
CHPFQ8IZ52 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CHPFQ8IZ52 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.81■□□□□ 0.44
CHPFQ8IZ52 AL691403.2-201ENST00000618460 490 ntBASIC17.81■□□□□ 0.44
CHPFQ8IZ52 AC004706.3-202ENST00000621574 984 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms