Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 PCED1CP-201ENST00000419887 785 ntBASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 AL139384.1-201ENST00000612143 3047 ntBASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 AC124067.4-201ENST00000519691 2379 ntBASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 AC016396.2-201ENST00000562575 1417 ntBASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST2H3AQ71DI3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 DRAXINP1-201ENST00000437611 948 ntBASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 TSSC2-201ENST00000450217 709 ntBASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 AC091607.1-201ENST00000490318 1060 ntBASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 AC087388.1-201ENST00000571370 1112 ntBASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms