Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VSTM1Q6UX27 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.67■□□□□ 0.58
VSTM1Q6UX27 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.67■□□□□ 0.58
VSTM1Q6UX27 AC073648.2-201ENST00000510116 352 ntBASIC18.67■□□□□ 0.58
VSTM1Q6UX27 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.67■□□□□ 0.58
VSTM1Q6UX27 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.67■□□□□ 0.58
VSTM1Q6UX27 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.67■□□□□ 0.58
VSTM1Q6UX27 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VSTM1Q6UX27 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.67■□□□□ 0.58
VSTM1Q6UX27 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VSTM1Q6UX27 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VSTM1Q6UX27 AL773604.1-201ENST00000617417 272 ntBASIC18.67■□□□□ 0.58
VSTM1Q6UX27 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
VSTM1Q6UX27 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
VSTM1Q6UX27 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VSTM1Q6UX27 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
VSTM1Q6UX27 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VSTM1Q6UX27 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VSTM1Q6UX27 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 PP12613-201ENST00000424958 2230 ntBASIC18.66■□□□□ 0.58
VSTM1Q6UX27 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 AC009949.1-201ENST00000623048 1830 ntBASIC18.66■□□□□ 0.58
VSTM1Q6UX27 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 AC018712.1-201ENST00000455767 687 ntBASIC18.66■□□□□ 0.58
VSTM1Q6UX27 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 HLA-A-201ENST00000376802 1334 ntBASIC18.66■□□□□ 0.58
VSTM1Q6UX27 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VSTM1Q6UX27 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 RNPS1P1-201ENST00000507437 918 ntBASIC18.65■□□□□ 0.58
VSTM1Q6UX27 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VSTM1Q6UX27 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VSTM1Q6UX27 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
VSTM1Q6UX27 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 SART3-203ENST00000546611 1184 ntBASIC18.64■□□□□ 0.57
VSTM1Q6UX27 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 AP001005.1-201ENST00000571755 1248 ntBASIC18.64■□□□□ 0.57
VSTM1Q6UX27 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.64■□□□□ 0.57
VSTM1Q6UX27 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms