Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
BRAT1Q6PJG6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.54■□□□□ 0.4
BRAT1Q6PJG6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
BRAT1Q6PJG6 NOC2LP2-201ENST00000407594 1944 ntBASIC17.54■□□□□ 0.4
BRAT1Q6PJG6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRAT1Q6PJG6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRAT1Q6PJG6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
BRAT1Q6PJG6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRAT1Q6PJG6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
BRAT1Q6PJG6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 AC139887.3-201ENST00000568585 713 ntBASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 AC046185.3-201ENST00000623228 1824 ntBASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.53■□□□□ 0.4
BRAT1Q6PJG6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 AC134043.2-201ENST00000624206 2238 ntBASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 AC006557.2-201ENST00000592985 1240 ntBASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 AC008735.5-201ENST00000623544 497 ntBASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 NCF1C-201ENST00000438382 1427 ntBASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.52■□□□□ 0.4
BRAT1Q6PJG6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BRAT1Q6PJG6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.52■□□□□ 0.39
BRAT1Q6PJG6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.52■□□□□ 0.39
BRAT1Q6PJG6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.52■□□□□ 0.39
BRAT1Q6PJG6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.52■□□□□ 0.39
BRAT1Q6PJG6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.52■□□□□ 0.39
BRAT1Q6PJG6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 AC079776.4-201ENST00000511039 504 ntBASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 MIR7706-201ENST00000613747 67 ntBASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRAT1Q6PJG6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms