Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 HBZP1-201ENST00000354915 429 ntBASIC17.91■□□□□ 0.46
CASC4Q6P4E1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 MIR662-201ENST00000384847 95 ntBASIC17.91■□□□□ 0.46
CASC4Q6P4E1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 AC211429.1-201ENST00000415277 523 ntBASIC17.91■□□□□ 0.46
CASC4Q6P4E1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 MTCL1P1-201ENST00000446207 792 ntBASIC17.9■□□□□ 0.46
CASC4Q6P4E1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 VENTXP5-201ENST00000523979 775 ntBASIC17.9■□□□□ 0.46
CASC4Q6P4E1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.9■□□□□ 0.46
CASC4Q6P4E1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
CASC4Q6P4E1 AD000864.1-201ENST00000624076 2295 ntBASIC17.89■□□□□ 0.46
CASC4Q6P4E1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CASC4Q6P4E1 LINC01311-201ENST00000565162 1445 ntBASIC17.89■□□□□ 0.46
CASC4Q6P4E1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CASC4Q6P4E1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 AC005332.3-201ENST00000589904 676 ntBASIC17.89■□□□□ 0.45
CASC4Q6P4E1 LINC01023-201ENST00000606054 436 ntBASIC17.89■□□□□ 0.45
CASC4Q6P4E1 AC006011.2-201ENST00000621313 1158 ntBASIC17.89■□□□□ 0.45
CASC4Q6P4E1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms