Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 AC079776.2-201ENST00000641154 1609 ntBASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 HLA-A-201ENST00000376802 1334 ntBASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 RPS2P1-201ENST00000434010 821 ntBASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 AC018712.1-201ENST00000455767 687 ntBASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 AP001005.1-201ENST00000571755 1248 ntBASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PRAMEF20Q5VT98 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 SPDYE21P-201ENST00000413323 827 ntBASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 AL031284.1-201ENST00000419297 478 ntBASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 MTDHP4-201ENST00000600287 670 ntBASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 AC148477.5-201ENST00000625164 1645 ntBASIC16.05■□□□□ 0.16
PRAMEF20Q5VT98 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 AL020989.1-201ENST00000422979 469 ntBASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 HNRNPDP1-201ENST00000439535 754 ntBASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 AL049840.3-201ENST00000602669 611 ntBASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 AC025062.2-201ENST00000605477 670 ntBASIC16.04■□□□□ 0.16
PRAMEF20Q5VT98 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms