Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.34■□□□□ 0.05
FAM27BQ5VT28 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
FAM27BQ5VT28 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.34■□□□□ 0.05
FAM27BQ5VT28 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.34■□□□□ 0.05
FAM27BQ5VT28 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
FAM27BQ5VT28 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FAM27BQ5VT28 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
FAM27BQ5VT28 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
FAM27BQ5VT28 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
FAM27BQ5VT28 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.34■□□□□ 0.05
FAM27BQ5VT28 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
FAM27BQ5VT28 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
FAM27BQ5VT28 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
FAM27BQ5VT28 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
FAM27BQ5VT28 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
FAM27BQ5VT28 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
FAM27BQ5VT28 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
FAM27BQ5VT28 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
FAM27BQ5VT28 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 NUS1P1-201ENST00000446295 882 ntBASIC15.33■□□□□ 0.04
FAM27BQ5VT28 STK19B-204ENST00000512515 211 ntBASIC15.33■□□□□ 0.04
FAM27BQ5VT28 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 AC132938.5-201ENST00000624980 1813 ntBASIC15.33■□□□□ 0.04
FAM27BQ5VT28 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 FZD10-202ENST00000539839 3282 ntBASIC15.33■□□□□ 0.04
FAM27BQ5VT28 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM27BQ5VT28 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 PMPCAP1-201ENST00000508114 1576 ntBASIC15.32■□□□□ 0.04
FAM27BQ5VT28 AC009336.1-201ENST00000608941 1553 ntBASIC15.32■□□□□ 0.04
FAM27BQ5VT28 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 AC073592.5-201ENST00000624854 528 ntBASIC15.32■□□□□ 0.04
FAM27BQ5VT28 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 AP000867.4-201ENST00000641616 219 ntBASIC15.32■□□□□ 0.04
FAM27BQ5VT28 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 AC116353.5-201ENST00000638148 1699 ntBASIC15.32■□□□□ 0.04
FAM27BQ5VT28 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM27BQ5VT28 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms