Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC144BQ3MJ40 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC144BQ3MJ40 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC144BQ3MJ40 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC144BQ3MJ40 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC144BQ3MJ40 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC144BQ3MJ40 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC144BQ3MJ40 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC144BQ3MJ40 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC144BQ3MJ40 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 PMS2P7-201ENST00000506558 1336 ntBASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 RPS2P28-201ENST00000314255 741 ntBASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 ABCD1P5-201ENST00000445663 754 ntBASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 AC092865.5-201ENST00000545435 363 ntBASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 SART3-203ENST00000546611 1184 ntBASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 AC021087.4-201ENST00000563761 564 ntBASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 TERC-201ENST00000602385 541 ntBASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CCDC144BQ3MJ40 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 KRT18P65-201ENST00000439811 1286 ntBASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC144BQ3MJ40 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC144BQ3MJ40 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC144BQ3MJ40 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC144BQ3MJ40 AL096828.2-201ENST00000567259 1965 ntBASIC20.33■□□□□ 0.84
CCDC144BQ3MJ40 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC144BQ3MJ40 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC144BQ3MJ40 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC144BQ3MJ40 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC144BQ3MJ40 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC144BQ3MJ40 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC144BQ3MJ40 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CCDC144BQ3MJ40 ZNF259P1-201ENST00000407656 1365 ntBASIC20.33■□□□□ 0.84
CCDC144BQ3MJ40 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC144BQ3MJ40 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC144BQ3MJ40 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 AD000864.1-201ENST00000624076 2295 ntBASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms