Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAE1P78406 AC093525.9-201ENST00000624961 1746 ntBASIC16.62■□□□□ 0.25
RAE1P78406 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAE1P78406 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RAE1P78406 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.61■□□□□ 0.25
RAE1P78406 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.61■□□□□ 0.25
RAE1P78406 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.61■□□□□ 0.25
RAE1P78406 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAE1P78406 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.61■□□□□ 0.25
RAE1P78406 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.61■□□□□ 0.25
RAE1P78406 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAE1P78406 KRT18P35-201ENST00000510488 1269 ntBASIC16.61■□□□□ 0.25
RAE1P78406 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.61■□□□□ 0.25
RAE1P78406 AC111152.3-201ENST00000569699 673 ntBASIC16.61■□□□□ 0.25
RAE1P78406 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RAE1P78406 BNIP3P18-201ENST00000593976 575 ntBASIC16.61■□□□□ 0.25
RAE1P78406 AD001527.2-201ENST00000622994 785 ntBASIC16.61■□□□□ 0.25
RAE1P78406 AL358472.4-201ENST00000633140 710 ntBASIC16.61■□□□□ 0.25
RAE1P78406 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAE1P78406 AP000550.4-202ENST00000639755 178 ntBASIC16.61■□□□□ 0.25
RAE1P78406 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.61■□□□□ 0.25
RAE1P78406 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAE1P78406 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAE1P78406 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
RAE1P78406 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.61■□□□□ 0.25
RAE1P78406 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAE1P78406 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.61■□□□□ 0.25
RAE1P78406 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
RAE1P78406 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAE1P78406 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAE1P78406 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAE1P78406 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAE1P78406 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAE1P78406 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAE1P78406 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RAE1P78406 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAE1P78406 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAE1P78406 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAE1P78406 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAE1P78406 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAE1P78406 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.6■□□□□ 0.25
RAE1P78406 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAE1P78406 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAE1P78406 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.6■□□□□ 0.25
RAE1P78406 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
RAE1P78406 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAE1P78406 LINC02012-201ENST00000608206 1725 ntBASIC16.6■□□□□ 0.25
RAE1P78406 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAE1P78406 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.6■□□□□ 0.25
RAE1P78406 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAE1P78406 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.6■□□□□ 0.25
RAE1P78406 IGHV3-47-201ENST00000425060 335 ntBASIC16.6■□□□□ 0.25
RAE1P78406 KRT17P6-201ENST00000453795 1220 ntBASIC16.6■□□□□ 0.25
RAE1P78406 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.6■□□□□ 0.25
RAE1P78406 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.6■□□□□ 0.25
RAE1P78406 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.6■□□□□ 0.25
RAE1P78406 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.6■□□□□ 0.25
RAE1P78406 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
RAE1P78406 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAE1P78406 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.6■□□□□ 0.25
RAE1P78406 NPAP1P7-201ENST00000613027 823 ntBASIC16.6■□□□□ 0.25
RAE1P78406 AC132938.5-201ENST00000624980 1813 ntBASIC16.6■□□□□ 0.25
RAE1P78406 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.6■□□□□ 0.25
RAE1P78406 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAE1P78406 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
RAE1P78406 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAE1P78406 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAE1P78406 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.6■□□□□ 0.25
RAE1P78406 NKILA-202ENST00000614771 2598 ntBASIC16.6■□□□□ 0.25
RAE1P78406 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAE1P78406 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAE1P78406 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAE1P78406 NSUN5P1-202ENST00000421140 1535 ntBASIC16.6■□□□□ 0.25
RAE1P78406 NSUN5P2-203ENST00000457352 1529 ntBASIC16.6■□□□□ 0.25
RAE1P78406 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAE1P78406 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAE1P78406 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAE1P78406 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAE1P78406 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RAE1P78406 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAE1P78406 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAE1P78406 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAE1P78406 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAE1P78406 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAE1P78406 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAE1P78406 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAE1P78406 INTS4P1-201ENST00000438455 1935 ntBASIC16.59■□□□□ 0.25
RAE1P78406 AC092053.1-201ENST00000605787 1936 ntBASIC16.59■□□□□ 0.25
RAE1P78406 AC099398.1-201ENST00000567919 2776 ntBASIC16.59■□□□□ 0.25
RAE1P78406 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAE1P78406 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.59■□□□□ 0.25
RAE1P78406 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAE1P78406 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.59■□□□□ 0.25
RAE1P78406 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RAE1P78406 LINC00265-3P-201ENST00000447588 903 ntBASIC16.59■□□□□ 0.25
RAE1P78406 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.59■□□□□ 0.25
RAE1P78406 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.59■□□□□ 0.25
RAE1P78406 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.59■□□□□ 0.25
RAE1P78406 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RAE1P78406 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms