Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
AP1S1P61966 AC148477.5-201ENST00000625164 1645 ntBASIC17.63■□□□□ 0.41
AP1S1P61966 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
AP1S1P61966 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.63■□□□□ 0.41
AP1S1P61966 BX005266.1-201ENST00000473402 457 ntBASIC17.63■□□□□ 0.41
AP1S1P61966 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.63■□□□□ 0.41
AP1S1P61966 AC073648.2-201ENST00000510116 352 ntBASIC17.63■□□□□ 0.41
AP1S1P61966 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.63■□□□□ 0.41
AP1S1P61966 AP002469.2-201ENST00000531724 424 ntBASIC17.63■□□□□ 0.41
AP1S1P61966 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.63■□□□□ 0.41
AP1S1P61966 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.63■□□□□ 0.41
AP1S1P61966 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
AP1S1P61966 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.63■□□□□ 0.41
AP1S1P61966 AL121894.2-201ENST00000602977 491 ntBASIC17.63■□□□□ 0.41
AP1S1P61966 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.63■□□□□ 0.41
AP1S1P61966 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
AP1S1P61966 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.63■□□□□ 0.41
AP1S1P61966 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.63■□□□□ 0.41
AP1S1P61966 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
AP1S1P61966 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
AP1S1P61966 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 OR6D1P-202ENST00000641007 5290 ntBASIC17.63■□□□□ 0.41
AP1S1P61966 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.62■□□□□ 0.41
AP1S1P61966 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S1P61966 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
AP1S1P61966 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.62■□□□□ 0.41
AP1S1P61966 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S1P61966 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
AP1S1P61966 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S1P61966 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.62■□□□□ 0.41
AP1S1P61966 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
AP1S1P61966 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S1P61966 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.62■□□□□ 0.41
AP1S1P61966 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.62■□□□□ 0.41
AP1S1P61966 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.62■□□□□ 0.41
AP1S1P61966 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
AP1S1P61966 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.62■□□□□ 0.41
AP1S1P61966 FAM197Y8-203ENST00000450145 560 ntBASIC17.62■□□□□ 0.41
AP1S1P61966 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.62■□□□□ 0.41
AP1S1P61966 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.62■□□□□ 0.41
AP1S1P61966 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S1P61966 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.62■□□□□ 0.41
AP1S1P61966 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.62■□□□□ 0.41
AP1S1P61966 AC064862.7-201ENST00000604520 867 ntBASIC17.62■□□□□ 0.41
AP1S1P61966 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.62■□□□□ 0.41
AP1S1P61966 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
AP1S1P61966 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S1P61966 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.62■□□□□ 0.41
AP1S1P61966 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S1P61966 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S1P61966 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S1P61966 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.62■□□□□ 0.41
AP1S1P61966 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S1P61966 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
AP1S1P61966 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.62■□□□□ 0.41
AP1S1P61966 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.62■□□□□ 0.41
AP1S1P61966 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S1P61966 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.61■□□□□ 0.41
AP1S1P61966 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S1P61966 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S1P61966 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S1P61966 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S1P61966 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
AP1S1P61966 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S1P61966 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
AP1S1P61966 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
AP1S1P61966 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
AP1S1P61966 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.61■□□□□ 0.41
AP1S1P61966 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.61■□□□□ 0.41
AP1S1P61966 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S1P61966 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S1P61966 KRT18P67-201ENST00000432816 1264 ntBASIC17.61■□□□□ 0.41
AP1S1P61966 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.61■□□□□ 0.41
AP1S1P61966 AF186996.4-201ENST00000467186 377 ntBASIC17.61■□□□□ 0.41
AP1S1P61966 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
AP1S1P61966 AC021087.4-201ENST00000563761 564 ntBASIC17.61■□□□□ 0.41
AP1S1P61966 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.61■□□□□ 0.41
AP1S1P61966 MTDHP4-201ENST00000600287 670 ntBASIC17.61■□□□□ 0.41
AP1S1P61966 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.61■□□□□ 0.41
AP1S1P61966 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S1P61966 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S1P61966 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms