Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.85□□□□□ -0.35
APOC4P55056 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC4P55056 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC4P55056 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.84□□□□□ -0.35
APOC4P55056 FER1L4-210ENST00000615531 5998 ntBASIC12.84□□□□□ -0.35
APOC4P55056 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
APOC4P55056 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOC4P55056 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
APOC4P55056 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC4P55056 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC4P55056 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOC4P55056 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC4P55056 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOC4P55056 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC12.84□□□□□ -0.35
APOC4P55056 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOC4P55056 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC4P55056 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC4P55056 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOC4P55056 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
APOC4P55056 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.84□□□□□ -0.35
APOC4P55056 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.84□□□□□ -0.35
APOC4P55056 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.84□□□□□ -0.35
APOC4P55056 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOC4P55056 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.84□□□□□ -0.35
APOC4P55056 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
APOC4P55056 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.84□□□□□ -0.35
APOC4P55056 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC4P55056 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.84□□□□□ -0.35
APOC4P55056 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.84□□□□□ -0.35
APOC4P55056 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.84□□□□□ -0.35
APOC4P55056 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.84□□□□□ -0.35
APOC4P55056 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.84□□□□□ -0.35
APOC4P55056 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.84□□□□□ -0.35
APOC4P55056 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
APOC4P55056 NCF1C-201ENST00000438382 1427 ntBASIC12.84□□□□□ -0.35
APOC4P55056 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOC4P55056 AC009113.1-201ENST00000570267 2443 ntBASIC12.84□□□□□ -0.35
APOC4P55056 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC12.84□□□□□ -0.35
APOC4P55056 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC4P55056 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC4P55056 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
APOC4P55056 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC4P55056 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
APOC4P55056 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.84□□□□□ -0.35
APOC4P55056 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOC4P55056 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.84□□□□□ -0.35
APOC4P55056 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC12.84□□□□□ -0.35
APOC4P55056 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOC4P55056 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
APOC4P55056 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC12.84□□□□□ -0.35
APOC4P55056 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC4P55056 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
APOC4P55056 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
APOC4P55056 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
APOC4P55056 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
APOC4P55056 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
APOC4P55056 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC4P55056 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC4P55056 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOC4P55056 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOC4P55056 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC12.83□□□□□ -0.36
APOC4P55056 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC4P55056 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC4P55056 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOC4P55056 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOC4P55056 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOC4P55056 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.83□□□□□ -0.36
APOC4P55056 PMS2P1-201ENST00000431037 1228 ntBASIC12.83□□□□□ -0.36
APOC4P55056 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
APOC4P55056 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.83□□□□□ -0.36
APOC4P55056 AC092910.1-201ENST00000482027 1129 ntBASIC12.83□□□□□ -0.36
APOC4P55056 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.83□□□□□ -0.36
APOC4P55056 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC4P55056 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.83□□□□□ -0.36
APOC4P55056 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.83□□□□□ -0.36
APOC4P55056 STK25P1-201ENST00000585406 838 ntBASIC12.83□□□□□ -0.36
APOC4P55056 AC019129.2-201ENST00000609837 1235 ntBASIC12.83□□□□□ -0.36
APOC4P55056 MIR7706-201ENST00000613747 67 ntBASIC12.83□□□□□ -0.36
APOC4P55056 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
APOC4P55056 AC005593.1-201ENST00000624894 515 ntBASIC12.83□□□□□ -0.36
APOC4P55056 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC4P55056 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.83□□□□□ -0.36
APOC4P55056 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
APOC4P55056 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC12.83□□□□□ -0.36
APOC4P55056 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC4P55056 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC4P55056 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC4P55056 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
APOC4P55056 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
APOC4P55056 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC4P55056 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC12.83□□□□□ -0.36
APOC4P55056 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC4P55056 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
APOC4P55056 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC12.82□□□□□ -0.36
APOC4P55056 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms