Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC25A1P53007 AC122714.2-201ENST00000502787 707 ntBASIC15.57■□□□□ 0.08
SLC25A1P53007 GUSBP12-201ENST00000513727 720 ntBASIC15.57■□□□□ 0.08
SLC25A1P53007 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC25A1P53007 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC25A1P53007 AL353801.3-201ENST00000609898 542 ntBASIC15.57■□□□□ 0.08
SLC25A1P53007 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SLC25A1P53007 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC25A1P53007 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SLC25A1P53007 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC25A1P53007 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC25A1P53007 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC25A1P53007 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC25A1P53007 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC25A1P53007 AC106886.4-201ENST00000623557 2502 ntBASIC15.57■□□□□ 0.08
SLC25A1P53007 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC25A1P53007 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC25A1P53007 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SLC25A1P53007 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC25A1P53007 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SLC25A1P53007 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC25A1P53007 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SLC25A1P53007 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 KRT18P57-201ENST00000443599 1254 ntBASIC15.56■□□□□ 0.08
SLC25A1P53007 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
SLC25A1P53007 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC25A1P53007 AC109462.3-201ENST00000573934 613 ntBASIC15.56■□□□□ 0.08
SLC25A1P53007 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC25A1P53007 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
SLC25A1P53007 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SLC25A1P53007 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SLC25A1P53007 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC25A1P53007 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC25A1P53007 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC25A1P53007 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC25A1P53007 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SLC25A1P53007 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
SLC25A1P53007 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
SLC25A1P53007 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC25A1P53007 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC25A1P53007 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC25A1P53007 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC25A1P53007 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC25A1P53007 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC25A1P53007 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC25A1P53007 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC25A1P53007 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC25A1P53007 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC25A1P53007 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC25A1P53007 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC25A1P53007 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SLC25A1P53007 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SLC25A1P53007 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SLC25A1P53007 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC25A1P53007 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC25A1P53007 AC125634.1-201ENST00000438758 1403 ntBASIC15.55■□□□□ 0.08
SLC25A1P53007 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC25A1P53007 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SLC25A1P53007 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC25A1P53007 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC25A1P53007 RN7SL606P-201ENST00000472779 293 ntBASIC15.55■□□□□ 0.08
SLC25A1P53007 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC25A1P53007 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC25A1P53007 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC25A1P53007 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.55■□□□□ 0.08
SLC25A1P53007 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC25A1P53007 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC25A1P53007 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC25A1P53007 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
SLC25A1P53007 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC25A1P53007 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC25A1P53007 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC25A1P53007 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC25A1P53007 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC25A1P53007 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC25A1P53007 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC25A1P53007 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC25A1P53007 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms