Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.34■□□□□ 0.69
GPC3P51654 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GPC3P51654 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 KLF4P1-201ENST00000412782 1185 ntBASIC19.34■□□□□ 0.69
GPC3P51654 KRT18P27-201ENST00000427733 1299 ntBASIC19.34■□□□□ 0.69
GPC3P51654 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
GPC3P51654 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.34■□□□□ 0.69
GPC3P51654 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
GPC3P51654 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.34■□□□□ 0.69
GPC3P51654 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.34■□□□□ 0.69
GPC3P51654 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.34■□□□□ 0.69
GPC3P51654 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
GPC3P51654 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.34■□□□□ 0.69
GPC3P51654 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 AC012317.2-201ENST00000623305 2251 ntBASIC19.34■□□□□ 0.69
GPC3P51654 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GPC3P51654 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
GPC3P51654 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GPC3P51654 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
GPC3P51654 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GPC3P51654 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
GPC3P51654 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GPC3P51654 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.33■□□□□ 0.69
GPC3P51654 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.33■□□□□ 0.69
GPC3P51654 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.33■□□□□ 0.69
GPC3P51654 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
GPC3P51654 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.33■□□□□ 0.69
GPC3P51654 AC003669.1-201ENST00000334569 611 ntBASIC19.33■□□□□ 0.68
GPC3P51654 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
GPC3P51654 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.33■□□□□ 0.68
GPC3P51654 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.33■□□□□ 0.68
GPC3P51654 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.33■□□□□ 0.68
GPC3P51654 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.33■□□□□ 0.68
GPC3P51654 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
GPC3P51654 RNA5SP415-201ENST00000517246 115 ntBASIC19.33■□□□□ 0.68
GPC3P51654 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.33■□□□□ 0.68
GPC3P51654 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
GPC3P51654 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GPC3P51654 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.33■□□□□ 0.68
GPC3P51654 AC034105.1-201ENST00000563488 319 ntBASIC19.33■□□□□ 0.68
GPC3P51654 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.33■□□□□ 0.68
GPC3P51654 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
GPC3P51654 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.33■□□□□ 0.68
GPC3P51654 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.33■□□□□ 0.68
GPC3P51654 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
GPC3P51654 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
GPC3P51654 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.33■□□□□ 0.68
GPC3P51654 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
GPC3P51654 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.33■□□□□ 0.68
GPC3P51654 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
GPC3P51654 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GPC3P51654 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GPC3P51654 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GPC3P51654 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GPC3P51654 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GPC3P51654 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GPC3P51654 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GPC3P51654 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GPC3P51654 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GPC3P51654 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
GPC3P51654 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GPC3P51654 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GPC3P51654 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.32■□□□□ 0.68
GPC3P51654 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.32■□□□□ 0.68
GPC3P51654 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GPC3P51654 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.32■□□□□ 0.68
GPC3P51654 POLD2P1-201ENST00000511220 997 ntBASIC19.32■□□□□ 0.68
GPC3P51654 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.32■□□□□ 0.68
GPC3P51654 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.32■□□□□ 0.68
GPC3P51654 STK25P1-201ENST00000585406 838 ntBASIC19.32■□□□□ 0.68
GPC3P51654 AC006557.2-201ENST00000592985 1240 ntBASIC19.32■□□□□ 0.68
GPC3P51654 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.32■□□□□ 0.68
GPC3P51654 AC117500.6-201ENST00000624871 588 ntBASIC19.32■□□□□ 0.68
GPC3P51654 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
GPC3P51654 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
GPC3P51654 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GPC3P51654 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.32■□□□□ 0.68
GPC3P51654 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
GPC3P51654 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms