Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 KRT18P1-202ENST00000452408 1331 ntBASIC16.32■□□□□ 0.2
RNF144AP50876 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF144AP50876 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF144AP50876 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF144AP50876 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF144AP50876 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.32■□□□□ 0.2
RNF144AP50876 AC010460.3-201ENST00000511359 1579 ntBASIC16.32■□□□□ 0.2
RNF144AP50876 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF144AP50876 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF144AP50876 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF144AP50876 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF144AP50876 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF144AP50876 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF144AP50876 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.32■□□□□ 0.2
RNF144AP50876 AC116407.2-201ENST00000613639 860 ntBASIC16.32■□□□□ 0.2
RNF144AP50876 AC116407.4-201ENST00000623319 1061 ntBASIC16.32■□□□□ 0.2
RNF144AP50876 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF144AP50876 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF144AP50876 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF144AP50876 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF144AP50876 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RNF144AP50876 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
RNF144AP50876 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RNF144AP50876 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 OR6D1P-203ENST00000641209 4860 ntBASIC16.31■□□□□ 0.2
RNF144AP50876 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF144AP50876 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 RN7SL606P-201ENST00000472779 293 ntBASIC16.31■□□□□ 0.2
RNF144AP50876 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF144AP50876 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 NIFKP4-201ENST00000567275 1192 ntBASIC16.31■□□□□ 0.2
RNF144AP50876 AP005901.3-202ENST00000581653 237 ntBASIC16.31■□□□□ 0.2
RNF144AP50876 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF144AP50876 AL121672.3-201ENST00000608644 468 ntBASIC16.31■□□□□ 0.2
RNF144AP50876 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF144AP50876 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
RNF144AP50876 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF144AP50876 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF144AP50876 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF144AP50876 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF144AP50876 PCDHA12-202ENST00000613593 2588 ntBASIC16.3■□□□□ 0.2
RNF144AP50876 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RNF144AP50876 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RNF144AP50876 TSSC2-201ENST00000450217 709 ntBASIC16.3■□□□□ 0.2
RNF144AP50876 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.3■□□□□ 0.2
RNF144AP50876 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF144AP50876 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RNF144AP50876 AC005336.2-201ENST00000593183 939 ntBASIC16.3■□□□□ 0.2
RNF144AP50876 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF144AP50876 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RNF144AP50876 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
RNF144AP50876 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF144AP50876 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RNF144AP50876 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF144AP50876 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF144AP50876 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF144AP50876 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
RNF144AP50876 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF144AP50876 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms