Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRIM2P49643 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRIM2P49643 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRIM2P49643 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PRIM2P49643 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PRIM2P49643 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PRIM2P49643 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PRIM2P49643 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.71■□□□□ 0.27
PRIM2P49643 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRIM2P49643 LINC00304-203ENST00000565008 1864 ntBASIC16.71■□□□□ 0.27
PRIM2P49643 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PRIM2P49643 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.71■□□□□ 0.27
PRIM2P49643 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRIM2P49643 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PRIM2P49643 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRIM2P49643 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.71■□□□□ 0.27
PRIM2P49643 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRIM2P49643 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.71■□□□□ 0.27
PRIM2P49643 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.71■□□□□ 0.27
PRIM2P49643 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRIM2P49643 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRIM2P49643 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRIM2P49643 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRIM2P49643 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRIM2P49643 CROCCP2-202ENST00000412962 2773 ntBASIC16.71■□□□□ 0.27
PRIM2P49643 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PRIM2P49643 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRIM2P49643 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRIM2P49643 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRIM2P49643 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.71■□□□□ 0.27
PRIM2P49643 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.71■□□□□ 0.27
PRIM2P49643 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.71■□□□□ 0.27
PRIM2P49643 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRIM2P49643 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRIM2P49643 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.71■□□□□ 0.27
PRIM2P49643 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRIM2P49643 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.71■□□□□ 0.27
PRIM2P49643 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRIM2P49643 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRIM2P49643 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRIM2P49643 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRIM2P49643 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.71■□□□□ 0.26
PRIM2P49643 PCDHA12-202ENST00000613593 2588 ntBASIC16.71■□□□□ 0.26
PRIM2P49643 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
PRIM2P49643 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
PRIM2P49643 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.71■□□□□ 0.26
PRIM2P49643 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRIM2P49643 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRIM2P49643 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRIM2P49643 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRIM2P49643 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.7■□□□□ 0.26
PRIM2P49643 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRIM2P49643 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PRIM2P49643 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRIM2P49643 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRIM2P49643 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.7■□□□□ 0.26
PRIM2P49643 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRIM2P49643 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.7■□□□□ 0.26
PRIM2P49643 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRIM2P49643 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRIM2P49643 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRIM2P49643 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRIM2P49643 AL353692.3-201ENST00000407031 1396 ntBASIC16.7■□□□□ 0.26
PRIM2P49643 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.7■□□□□ 0.26
PRIM2P49643 FAM210CP-201ENST00000445714 574 ntBASIC16.7■□□□□ 0.26
PRIM2P49643 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.7■□□□□ 0.26
PRIM2P49643 DUX4L26-201ENST00000489078 1255 ntBASIC16.7■□□□□ 0.26
PRIM2P49643 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.7■□□□□ 0.26
PRIM2P49643 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.7■□□□□ 0.26
PRIM2P49643 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.7■□□□□ 0.26
PRIM2P49643 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.7■□□□□ 0.26
PRIM2P49643 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PRIM2P49643 HYMAI.1-201ENST00000620949 238 ntBASIC16.7■□□□□ 0.26
PRIM2P49643 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRIM2P49643 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRIM2P49643 AL139384.1-201ENST00000612143 3047 ntBASIC16.7■□□□□ 0.26
PRIM2P49643 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.7■□□□□ 0.26
PRIM2P49643 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.7■□□□□ 0.26
PRIM2P49643 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRIM2P49643 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
PRIM2P49643 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRIM2P49643 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.7■□□□□ 0.26
PRIM2P49643 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.7■□□□□ 0.26
PRIM2P49643 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRIM2P49643 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.7■□□□□ 0.26
PRIM2P49643 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRIM2P49643 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
PRIM2P49643 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRIM2P49643 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRIM2P49643 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRIM2P49643 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.69■□□□□ 0.26
PRIM2P49643 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRIM2P49643 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.69■□□□□ 0.26
PRIM2P49643 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRIM2P49643 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRIM2P49643 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PRIM2P49643 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.69■□□□□ 0.26
PRIM2P49643 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.69■□□□□ 0.26
PRIM2P49643 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRIM2P49643 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms