Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC109462.3-201ENST00000573934 613 ntBASIC18.35■□□□□ 0.53
SLC1A1P43005 AL138831.2-201ENST00000606564 490 ntBASIC18.35■□□□□ 0.53
SLC1A1P43005 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SLC1A1P43005 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SLC1A1P43005 AL592071.1-201ENST00000611956 408 ntBASIC18.35■□□□□ 0.53
SLC1A1P43005 AC124864.1-201ENST00000623408 392 ntBASIC18.35■□□□□ 0.53
SLC1A1P43005 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SLC1A1P43005 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A1P43005 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A1P43005 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A1P43005 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A1P43005 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A1P43005 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC1A1P43005 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A1P43005 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A1P43005 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A1P43005 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
SLC1A1P43005 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SLC1A1P43005 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC1A1P43005 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A1P43005 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A1P43005 LINC02012-201ENST00000608206 1725 ntBASIC18.35■□□□□ 0.53
SLC1A1P43005 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SLC1A1P43005 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC1A1P43005 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A1P43005 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A1P43005 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC1A1P43005 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A1P43005 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SLC1A1P43005 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A1P43005 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A1P43005 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A1P43005 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLC1A1P43005 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC1A1P43005 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A1P43005 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A1P43005 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SLC1A1P43005 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A1P43005 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A1P43005 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC1A1P43005 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A1P43005 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC1A1P43005 AC011498.5-201ENST00000592027 486 ntBASIC18.34■□□□□ 0.53
SLC1A1P43005 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A1P43005 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SLC1A1P43005 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLC1A1P43005 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A1P43005 AC093525.9-201ENST00000624961 1746 ntBASIC18.34■□□□□ 0.53
SLC1A1P43005 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A1P43005 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A1P43005 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A1P43005 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
SLC1A1P43005 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
SLC1A1P43005 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC1A1P43005 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC1A1P43005 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC1A1P43005 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC1A1P43005 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC1A1P43005 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SLC1A1P43005 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC1A1P43005 AC099398.1-201ENST00000567919 2776 ntBASIC18.33■□□□□ 0.53
SLC1A1P43005 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC1A1P43005 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC1A1P43005 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A1P43005 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A1P43005 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A1P43005 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SLC1A1P43005 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A1P43005 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC1A1P43005 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC1A1P43005 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.33■□□□□ 0.52
SLC1A1P43005 AC011840.4-201ENST00000578471 627 ntBASIC18.33■□□□□ 0.52
SLC1A1P43005 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC1A1P43005 IGHV3-41-201ENST00000613121 348 ntBASIC18.33■□□□□ 0.52
SLC1A1P43005 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC1A1P43005 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A1P43005 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A1P43005 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A1P43005 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A1P43005 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A1P43005 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC1A1P43005 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A1P43005 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A1P43005 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A1P43005 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A1P43005 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC1A1P43005 AC011676.5-201ENST00000624864 2660 ntBASIC18.32■□□□□ 0.52
SLC1A1P43005 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A1P43005 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A1P43005 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A1P43005 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SLC1A1P43005 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
SLC1A1P43005 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A1P43005 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A1P43005 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SLC1A1P43005 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC1A1P43005 FAM220CP-201ENST00000395253 831 ntBASIC18.32■□□□□ 0.52
SLC1A1P43005 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC1A1P43005 AC246785.2-201ENST00000432512 513 ntBASIC18.32■□□□□ 0.52
SLC1A1P43005 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms