Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SNCAP37840 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNCAP37840 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SNCAP37840 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCAP37840 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCAP37840 UNC93B2-201ENST00000285383 730 ntBASIC14.47□□□□□ -0.09
SNCAP37840 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.47□□□□□ -0.09
SNCAP37840 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.47□□□□□ -0.09
SNCAP37840 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNCAP37840 AP003041.3-201ENST00000527151 707 ntBASIC14.47□□□□□ -0.09
SNCAP37840 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.47□□□□□ -0.09
SNCAP37840 BX088651.1-201ENST00000540551 451 ntBASIC14.47□□□□□ -0.09
SNCAP37840 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.47□□□□□ -0.09
SNCAP37840 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.47□□□□□ -0.09
SNCAP37840 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.47□□□□□ -0.09
SNCAP37840 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.47□□□□□ -0.09
SNCAP37840 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.47□□□□□ -0.09
SNCAP37840 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.47□□□□□ -0.09
SNCAP37840 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNCAP37840 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.47□□□□□ -0.09
SNCAP37840 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCAP37840 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCAP37840 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.47□□□□□ -0.09
SNCAP37840 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.47□□□□□ -0.09
SNCAP37840 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCAP37840 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCAP37840 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNCAP37840 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCAP37840 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCAP37840 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.47□□□□□ -0.09
SNCAP37840 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SNCAP37840 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.47□□□□□ -0.09
SNCAP37840 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SNCAP37840 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.46□□□□□ -0.09
SNCAP37840 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
SNCAP37840 KRT18P55-202ENST00000578578 1546 ntBASIC14.46□□□□□ -0.09
SNCAP37840 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNCAP37840 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SNCAP37840 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SNCAP37840 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.46□□□□□ -0.09
SNCAP37840 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
SNCAP37840 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.46□□□□□ -0.09
SNCAP37840 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SNCAP37840 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.46□□□□□ -0.09
SNCAP37840 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNCAP37840 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SNCAP37840 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNCAP37840 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNCAP37840 AL355312.1-201ENST00000407115 2176 ntBASIC14.46□□□□□ -0.09
SNCAP37840 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNCAP37840 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNCAP37840 PRORSD1P-201ENST00000295112 541 ntBASIC14.46□□□□□ -0.09
SNCAP37840 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.46□□□□□ -0.09
SNCAP37840 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.46□□□□□ -0.09
SNCAP37840 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNCAP37840 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.46□□□□□ -0.09
SNCAP37840 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SNCAP37840 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.46□□□□□ -0.09
SNCAP37840 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.46□□□□□ -0.09
SNCAP37840 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.46□□□□□ -0.09
SNCAP37840 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.46□□□□□ -0.09
SNCAP37840 AL353719.1-201ENST00000566847 864 ntBASIC14.46□□□□□ -0.09
SNCAP37840 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.46□□□□□ -0.09
SNCAP37840 MIR4674-201ENST00000582457 87 ntBASIC14.46□□□□□ -0.09
SNCAP37840 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SNCAP37840 AC112497.1-201ENST00000624824 639 ntBASIC14.46□□□□□ -0.09
SNCAP37840 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.46□□□□□ -0.09
SNCAP37840 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNCAP37840 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNCAP37840 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SNCAP37840 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SNCAP37840 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNCAP37840 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNCAP37840 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNCAP37840 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SNCAP37840 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.45□□□□□ -0.1
SNCAP37840 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNCAP37840 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SNCAP37840 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SNCAP37840 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SNCAP37840 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNCAP37840 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNCAP37840 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SNCAP37840 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SNCAP37840 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SNCAP37840 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.45□□□□□ -0.1
SNCAP37840 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.45□□□□□ -0.1
SNCAP37840 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.45□□□□□ -0.1
SNCAP37840 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.45□□□□□ -0.1
SNCAP37840 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.45□□□□□ -0.1
SNCAP37840 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SNCAP37840 AP003071.4-201ENST00000562276 1284 ntBASIC14.45□□□□□ -0.1
SNCAP37840 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.45□□□□□ -0.1
SNCAP37840 WWOX-216ENST00000569818 525 ntBASIC14.45□□□□□ -0.1
SNCAP37840 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.45□□□□□ -0.1
SNCAP37840 MIR3180-4-201ENST00000582223 153 ntBASIC14.45□□□□□ -0.1
SNCAP37840 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNCAP37840 CR769767.2-201ENST00000622735 460 ntBASIC14.45□□□□□ -0.1
SNCAP37840 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SNCAP37840 AC116562.4-202ENST00000641738 218 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms