Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHKAP35790 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHKAP35790 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.51■□□□□ 0.55
CHKAP35790 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
CHKAP35790 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.51■□□□□ 0.55
CHKAP35790 SAPCD2P3-201ENST00000455031 850 ntBASIC18.51■□□□□ 0.55
CHKAP35790 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.51■□□□□ 0.55
CHKAP35790 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CHKAP35790 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHKAP35790 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.51■□□□□ 0.55
CHKAP35790 REXO1L6P-202ENST00000619970 1078 ntBASIC18.51■□□□□ 0.55
CHKAP35790 AL023806.1-201ENST00000603994 1649 ntBASIC18.51■□□□□ 0.55
CHKAP35790 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHKAP35790 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHKAP35790 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CHKAP35790 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHKAP35790 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHKAP35790 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHKAP35790 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.51■□□□□ 0.55
CHKAP35790 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHKAP35790 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHKAP35790 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.51■□□□□ 0.55
CHKAP35790 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHKAP35790 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHKAP35790 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHKAP35790 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.5■□□□□ 0.55
CHKAP35790 AC022898.2-201ENST00000616822 1312 ntBASIC18.5■□□□□ 0.55
CHKAP35790 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CHKAP35790 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
CHKAP35790 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CHKAP35790 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.5■□□□□ 0.55
CHKAP35790 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.5■□□□□ 0.55
CHKAP35790 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHKAP35790 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CHKAP35790 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.5■□□□□ 0.55
CHKAP35790 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.5■□□□□ 0.55
CHKAP35790 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHKAP35790 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHKAP35790 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.5■□□□□ 0.55
CHKAP35790 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.5■□□□□ 0.55
CHKAP35790 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.5■□□□□ 0.55
CHKAP35790 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHKAP35790 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHKAP35790 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHKAP35790 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.5■□□□□ 0.55
CHKAP35790 RCN1P2-201ENST00000398357 915 ntBASIC18.5■□□□□ 0.55
CHKAP35790 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.5■□□□□ 0.55
CHKAP35790 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.5■□□□□ 0.55
CHKAP35790 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.5■□□□□ 0.55
CHKAP35790 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.5■□□□□ 0.55
CHKAP35790 AL160237.2-201ENST00000556165 472 ntBASIC18.5■□□□□ 0.55
CHKAP35790 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHKAP35790 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CHKAP35790 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.5■□□□□ 0.55
CHKAP35790 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.5■□□□□ 0.55
CHKAP35790 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHKAP35790 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.5■□□□□ 0.55
CHKAP35790 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHKAP35790 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHKAP35790 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHKAP35790 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CHKAP35790 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CHKAP35790 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHKAP35790 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CHKAP35790 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.49■□□□□ 0.55
CHKAP35790 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CHKAP35790 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CHKAP35790 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.49■□□□□ 0.55
CHKAP35790 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
CHKAP35790 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.49■□□□□ 0.55
CHKAP35790 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.49■□□□□ 0.55
CHKAP35790 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.49■□□□□ 0.55
CHKAP35790 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.49■□□□□ 0.55
CHKAP35790 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.49■□□□□ 0.55
CHKAP35790 AL121912.1-201ENST00000603683 238 ntBASIC18.49■□□□□ 0.55
CHKAP35790 AL031008.1-201ENST00000619963 541 ntBASIC18.49■□□□□ 0.55
CHKAP35790 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 HTR7P1-202ENST00000624664 4411 ntBASIC18.49■□□□□ 0.55
CHKAP35790 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CHKAP35790 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.49■□□□□ 0.55
CHKAP35790 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHKAP35790 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms