Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LAMA1P25391 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17■□□□□ 0.31
LAMA1P25391 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LAMA1P25391 PTCHD3P3-201ENST00000403073 906 ntBASIC17■□□□□ 0.31
LAMA1P25391 AC140658.5-201ENST00000438532 169 ntBASIC17■□□□□ 0.31
LAMA1P25391 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17■□□□□ 0.31
LAMA1P25391 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17■□□□□ 0.31
LAMA1P25391 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17■□□□□ 0.31
LAMA1P25391 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LAMA1P25391 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17■□□□□ 0.31
LAMA1P25391 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17■□□□□ 0.31
LAMA1P25391 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17■□□□□ 0.31
LAMA1P25391 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LAMA1P25391 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LAMA1P25391 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LAMA1P25391 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
LAMA1P25391 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LAMA1P25391 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
LAMA1P25391 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LAMA1P25391 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17■□□□□ 0.31
LAMA1P25391 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17■□□□□ 0.31
LAMA1P25391 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17■□□□□ 0.31
LAMA1P25391 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17■□□□□ 0.31
LAMA1P25391 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17■□□□□ 0.31
LAMA1P25391 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17■□□□□ 0.31
LAMA1P25391 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
LAMA1P25391 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17■□□□□ 0.31
LAMA1P25391 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LAMA1P25391 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LAMA1P25391 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LAMA1P25391 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.99■□□□□ 0.31
LAMA1P25391 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.99■□□□□ 0.31
LAMA1P25391 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LAMA1P25391 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.99■□□□□ 0.31
LAMA1P25391 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
LAMA1P25391 MIR943-201ENST00000401286 94 ntBASIC16.99■□□□□ 0.31
LAMA1P25391 PMS2P4-201ENST00000412466 1052 ntBASIC16.99■□□□□ 0.31
LAMA1P25391 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.99■□□□□ 0.31
LAMA1P25391 FAM207CP-201ENST00000443486 507 ntBASIC16.99■□□□□ 0.31
LAMA1P25391 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.99■□□□□ 0.31
LAMA1P25391 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.99■□□□□ 0.31
LAMA1P25391 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.99■□□□□ 0.31
LAMA1P25391 REXO1L3P-201ENST00000622202 1288 ntBASIC16.99■□□□□ 0.31
LAMA1P25391 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.99■□□□□ 0.31
LAMA1P25391 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.99■□□□□ 0.31
LAMA1P25391 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LAMA1P25391 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
LAMA1P25391 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.99■□□□□ 0.31
LAMA1P25391 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LAMA1P25391 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LAMA1P25391 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LAMA1P25391 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LAMA1P25391 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LAMA1P25391 TUBB3P1-201ENST00000405796 1332 ntBASIC16.99■□□□□ 0.31
LAMA1P25391 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LAMA1P25391 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.99■□□□□ 0.31
LAMA1P25391 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LAMA1P25391 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
LAMA1P25391 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.99■□□□□ 0.31
LAMA1P25391 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LAMA1P25391 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LAMA1P25391 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.98■□□□□ 0.31
LAMA1P25391 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LAMA1P25391 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
LAMA1P25391 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LAMA1P25391 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.98■□□□□ 0.31
LAMA1P25391 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.98■□□□□ 0.31
LAMA1P25391 SPDYE11-202ENST00000450699 704 ntBASIC16.98■□□□□ 0.31
LAMA1P25391 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.98■□□□□ 0.31
LAMA1P25391 SPDYE9P-201ENST00000570642 692 ntBASIC16.98■□□□□ 0.31
LAMA1P25391 SPDYE22P-201ENST00000582158 798 ntBASIC16.98■□□□□ 0.31
LAMA1P25391 AL353135.1-201ENST00000606729 504 ntBASIC16.98■□□□□ 0.31
LAMA1P25391 SPDYE10P-202ENST00000612005 668 ntBASIC16.98■□□□□ 0.31
LAMA1P25391 SPDYE8P-202ENST00000612377 668 ntBASIC16.98■□□□□ 0.31
LAMA1P25391 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LAMA1P25391 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LAMA1P25391 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LAMA1P25391 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.98■□□□□ 0.31
LAMA1P25391 AL020996.1-203ENST00000536896 2307 ntBASIC16.98■□□□□ 0.31
LAMA1P25391 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LAMA1P25391 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LAMA1P25391 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.98■□□□□ 0.31
LAMA1P25391 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LAMA1P25391 AC103564.2-201ENST00000432853 1299 ntBASIC16.98■□□□□ 0.31
LAMA1P25391 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LAMA1P25391 ACTL9-202ENST00000612068 1252 ntBASIC16.98■□□□□ 0.31
LAMA1P25391 GGTLC5P-201ENST00000617623 998 ntBASIC16.98■□□□□ 0.31
LAMA1P25391 PI4KAP1-204ENST00000612579 1703 ntBASIC16.98■□□□□ 0.31
LAMA1P25391 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LAMA1P25391 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LAMA1P25391 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
LAMA1P25391 AL590787.1-201ENST00000568856 1315 ntBASIC16.98■□□□□ 0.31
LAMA1P25391 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.98■□□□□ 0.31
LAMA1P25391 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
LAMA1P25391 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LAMA1P25391 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LAMA1P25391 CRB3P1-201ENST00000449338 276 ntBASIC16.98■□□□□ 0.31
LAMA1P25391 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.98■□□□□ 0.31
LAMA1P25391 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.98■□□□□ 0.31
LAMA1P25391 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms