Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP24386 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP24386 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.42■□□□□ 0.22
CHMP24386 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP24386 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.42■□□□□ 0.22
CHMP24386 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP24386 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP24386 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP24386 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CHMP24386 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP24386 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CHMP24386 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP24386 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP24386 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP24386 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.41■□□□□ 0.22
CHMP24386 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP24386 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CHMP24386 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CHMP24386 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
CHMP24386 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP24386 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP24386 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.41■□□□□ 0.22
CHMP24386 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.41■□□□□ 0.22
CHMP24386 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP24386 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.41■□□□□ 0.22
CHMP24386 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP24386 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP24386 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP24386 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP24386 GUSBP12-201ENST00000513727 720 ntBASIC16.41■□□□□ 0.22
CHMP24386 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.41■□□□□ 0.22
CHMP24386 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CHMP24386 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP24386 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP24386 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP24386 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP24386 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP24386 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CHMP24386 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CHMP24386 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP24386 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP24386 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.41■□□□□ 0.22
CHMP24386 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP24386 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CHMP24386 AC132938.6-201ENST00000623828 1655 ntBASIC16.4■□□□□ 0.22
CHMP24386 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP24386 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP24386 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
CHMP24386 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
CHMP24386 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP24386 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP24386 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CHMP24386 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP24386 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP24386 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.4■□□□□ 0.22
CHMP24386 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP24386 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.4■□□□□ 0.22
CHMP24386 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP24386 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP24386 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CHMP24386 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.4■□□□□ 0.22
CHMP24386 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
CHMP24386 AC004263.2-201ENST00000617183 678 ntBASIC16.4■□□□□ 0.22
CHMP24386 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.4■□□□□ 0.22
CHMP24386 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CHMP24386 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP24386 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP24386 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP24386 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP24386 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP24386 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP24386 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP24386 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CHMP24386 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP24386 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP24386 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP24386 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CHMP24386 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CHMP24386 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP24386 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.39■□□□□ 0.21
CHMP24386 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP24386 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.39■□□□□ 0.21
CHMP24386 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP24386 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP24386 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CHMP24386 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP24386 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CHMP24386 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP24386 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP24386 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.39■□□□□ 0.21
CHMP24386 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP24386 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.39■□□□□ 0.21
CHMP24386 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CHMP24386 AC092329.2-201ENST00000598402 547 ntBASIC16.39■□□□□ 0.21
CHMP24386 IGHV3-41-201ENST00000613121 348 ntBASIC16.39■□□□□ 0.21
CHMP24386 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.39■□□□□ 0.21
CHMP24386 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.39■□□□□ 0.21
CHMP24386 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP24386 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP24386 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms