Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP11P24347 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.66■□□□□ 0.26
MMP11P24347 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.66■□□□□ 0.26
MMP11P24347 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP11P24347 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP11P24347 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MMP11P24347 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MMP11P24347 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.65■□□□□ 0.26
MMP11P24347 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.65■□□□□ 0.26
MMP11P24347 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
MMP11P24347 AC007967.3-201ENST00000434308 558 ntBASIC16.65■□□□□ 0.26
MMP11P24347 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.65■□□□□ 0.26
MMP11P24347 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.65■□□□□ 0.26
MMP11P24347 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.65■□□□□ 0.26
MMP11P24347 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.65■□□□□ 0.26
MMP11P24347 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.65■□□□□ 0.26
MMP11P24347 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.65■□□□□ 0.26
MMP11P24347 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MMP11P24347 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.65■□□□□ 0.26
MMP11P24347 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 AC148477.8-201ENST00000624298 468 ntBASIC16.65■□□□□ 0.26
MMP11P24347 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
MMP11P24347 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MMP11P24347 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.65■□□□□ 0.26
MMP11P24347 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.65■□□□□ 0.26
MMP11P24347 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.65■□□□□ 0.26
MMP11P24347 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MMP11P24347 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MMP11P24347 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.64■□□□□ 0.26
MMP11P24347 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.64■□□□□ 0.26
MMP11P24347 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
MMP11P24347 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP11P24347 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP11P24347 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MMP11P24347 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MMP11P24347 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP11P24347 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
MMP11P24347 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
MMP11P24347 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.64■□□□□ 0.25
MMP11P24347 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP11P24347 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP11P24347 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP11P24347 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.64■□□□□ 0.25
MMP11P24347 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.64■□□□□ 0.25
MMP11P24347 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
MMP11P24347 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.64■□□□□ 0.25
MMP11P24347 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.64■□□□□ 0.25
MMP11P24347 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.64■□□□□ 0.25
MMP11P24347 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
MMP11P24347 AC012313.1-201ENST00000593393 3059 ntBASIC16.64■□□□□ 0.25
MMP11P24347 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
MMP11P24347 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP11P24347 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MMP11P24347 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP11P24347 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP11P24347 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.64■□□□□ 0.25
MMP11P24347 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP11P24347 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.64■□□□□ 0.25
MMP11P24347 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.64■□□□□ 0.25
MMP11P24347 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
MMP11P24347 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
MMP11P24347 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
MMP11P24347 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
MMP11P24347 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP11P24347 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP11P24347 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MMP11P24347 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP11P24347 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.63■□□□□ 0.25
MMP11P24347 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP11P24347 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP11P24347 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP11P24347 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP11P24347 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP11P24347 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP11P24347 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP11P24347 RPS2P28-201ENST00000314255 741 ntBASIC16.63■□□□□ 0.25
MMP11P24347 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP11P24347 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP11P24347 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms