Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM17P0DL12 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM17P0DL12 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM17P0DL12 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM17P0DL12 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SMIM17P0DL12 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM17P0DL12 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM17P0DL12 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM17P0DL12 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM17P0DL12 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM17P0DL12 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SMIM17P0DL12 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM17P0DL12 MFAP1P1-201ENST00000442257 1255 ntBASIC13.11□□□□□ -0.31
SMIM17P0DL12 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM17P0DL12 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.11□□□□□ -0.31
SMIM17P0DL12 AC011506.1-201ENST00000474329 610 ntBASIC13.11□□□□□ -0.31
SMIM17P0DL12 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
SMIM17P0DL12 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM17P0DL12 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.11□□□□□ -0.31
SMIM17P0DL12 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
SMIM17P0DL12 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.11□□□□□ -0.31
SMIM17P0DL12 RARRES2P10-201ENST00000564312 460 ntBASIC13.11□□□□□ -0.31
SMIM17P0DL12 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC13.11□□□□□ -0.31
SMIM17P0DL12 DGCR10-201ENST00000609839 495 ntBASIC13.11□□□□□ -0.31
SMIM17P0DL12 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SMIM17P0DL12 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM17P0DL12 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SMIM17P0DL12 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SMIM17P0DL12 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SMIM17P0DL12 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SMIM17P0DL12 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM17P0DL12 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.11□□□□□ -0.31
SMIM17P0DL12 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM17P0DL12 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM17P0DL12 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM17P0DL12 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SMIM17P0DL12 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM17P0DL12 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SMIM17P0DL12 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.1□□□□□ -0.31
SMIM17P0DL12 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.1□□□□□ -0.31
SMIM17P0DL12 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.1□□□□□ -0.31
SMIM17P0DL12 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
SMIM17P0DL12 KRT18P23-201ENST00000435622 1283 ntBASIC13.1□□□□□ -0.31
SMIM17P0DL12 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 CA15P1-201ENST00000481698 905 ntBASIC13.1□□□□□ -0.31
SMIM17P0DL12 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.1□□□□□ -0.31
SMIM17P0DL12 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.1□□□□□ -0.31
SMIM17P0DL12 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.1□□□□□ -0.31
SMIM17P0DL12 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.1□□□□□ -0.31
SMIM17P0DL12 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.1□□□□□ -0.31
SMIM17P0DL12 AC006058.3-201ENST00000606217 1069 ntBASIC13.1□□□□□ -0.31
SMIM17P0DL12 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SMIM17P0DL12 FAM197Y4-202ENST00000622692 608 ntBASIC13.1□□□□□ -0.31
SMIM17P0DL12 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.1□□□□□ -0.31
SMIM17P0DL12 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
SMIM17P0DL12 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.1□□□□□ -0.31
SMIM17P0DL12 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.1□□□□□ -0.31
SMIM17P0DL12 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
SMIM17P0DL12 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 AC022898.2-201ENST00000616822 1312 ntBASIC13.1□□□□□ -0.31
SMIM17P0DL12 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.1□□□□□ -0.31
SMIM17P0DL12 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.1□□□□□ -0.31
SMIM17P0DL12 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.1□□□□□ -0.31
SMIM17P0DL12 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM17P0DL12 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.09□□□□□ -0.31
SMIM17P0DL12 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM17P0DL12 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.09□□□□□ -0.31
SMIM17P0DL12 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.09□□□□□ -0.31
SMIM17P0DL12 AC096733.2-201ENST00000609937 1394 ntBASIC13.09□□□□□ -0.31
SMIM17P0DL12 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.09□□□□□ -0.31
SMIM17P0DL12 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM17P0DL12 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SMIM17P0DL12 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM17P0DL12 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms