Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FAM228BP0C875 AC092647.4-201ENST00000457211 535 ntBASIC18.69■□□□□ 0.58
FAM228BP0C875 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FAM228BP0C875 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.69■□□□□ 0.58
FAM228BP0C875 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FAM228BP0C875 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
FAM228BP0C875 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FAM228BP0C875 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FAM228BP0C875 AC005915.1-201ENST00000624912 2018 ntBASIC18.69■□□□□ 0.58
FAM228BP0C875 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FAM228BP0C875 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.69■□□□□ 0.58
FAM228BP0C875 AC093525.9-201ENST00000624961 1746 ntBASIC18.69■□□□□ 0.58
FAM228BP0C875 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
FAM228BP0C875 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.68■□□□□ 0.58
FAM228BP0C875 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
FAM228BP0C875 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.68■□□□□ 0.58
FAM228BP0C875 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
FAM228BP0C875 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
FAM228BP0C875 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.68■□□□□ 0.58
FAM228BP0C875 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 AC105020.1-201ENST00000435356 2205 ntBASIC18.68■□□□□ 0.58
FAM228BP0C875 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.68■□□□□ 0.58
FAM228BP0C875 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.68■□□□□ 0.58
FAM228BP0C875 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
FAM228BP0C875 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.68■□□□□ 0.58
FAM228BP0C875 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.68■□□□□ 0.58
FAM228BP0C875 AC063952.2-201ENST00000498792 1227 ntBASIC18.68■□□□□ 0.58
FAM228BP0C875 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.68■□□□□ 0.58
FAM228BP0C875 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.68■□□□□ 0.58
FAM228BP0C875 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.68■□□□□ 0.58
FAM228BP0C875 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.68■□□□□ 0.58
FAM228BP0C875 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 FLJ38576-201ENST00000623820 2459 ntBASIC18.68■□□□□ 0.58
FAM228BP0C875 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.68■□□□□ 0.58
FAM228BP0C875 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.68■□□□□ 0.58
FAM228BP0C875 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
FAM228BP0C875 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.68■□□□□ 0.58
FAM228BP0C875 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.68■□□□□ 0.58
FAM228BP0C875 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FAM228BP0C875 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
FAM228BP0C875 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
FAM228BP0C875 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.67■□□□□ 0.58
FAM228BP0C875 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.67■□□□□ 0.58
FAM228BP0C875 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 RN7SL606P-201ENST00000472779 293 ntBASIC18.67■□□□□ 0.58
FAM228BP0C875 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.67■□□□□ 0.58
FAM228BP0C875 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.67■□□□□ 0.58
FAM228BP0C875 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.67■□□□□ 0.58
FAM228BP0C875 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM228BP0C875 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM228BP0C875 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
FAM228BP0C875 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM228BP0C875 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM228BP0C875 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM228BP0C875 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM228BP0C875 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.66■□□□□ 0.58
FAM228BP0C875 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM228BP0C875 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM228BP0C875 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM228BP0C875 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms