Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 SIRPAP1-201ENST00000448467 1770 ntBASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 BX276092.7-203ENST00000637198 1536 ntBASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 AC073621.1-201ENST00000392730 636 ntBASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 MIR1233-2-201ENST00000408138 82 ntBASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 MIR1233-1-201ENST00000408722 82 ntBASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 KRT18P3-201ENST00000451602 1288 ntBASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 AC136632.2-201ENST00000512891 861 ntBASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
RAB40ALP0C0E4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB40ALP0C0E4 HTR7P1-202ENST00000624664 4411 ntBASIC16.52■□□□□ 0.23
RAB40ALP0C0E4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB40ALP0C0E4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RAB40ALP0C0E4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.52■□□□□ 0.23
RAB40ALP0C0E4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.52■□□□□ 0.23
RAB40ALP0C0E4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB40ALP0C0E4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 AC009947.1-201ENST00000444350 727 ntBASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40ALP0C0E4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 AC132938.5-201ENST00000624980 1813 ntBASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 KLF4P1-201ENST00000412782 1185 ntBASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms