Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DOAP06340 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DOAP06340 AC046185.3-201ENST00000623228 1824 ntBASIC20.6■□□□□ 0.89
HLA-DOAP06340 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DOAP06340 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DOAP06340 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
HLA-DOAP06340 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.59■□□□□ 0.89
HLA-DOAP06340 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DOAP06340 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
HLA-DOAP06340 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DOAP06340 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DOAP06340 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DOAP06340 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
HLA-DOAP06340 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DOAP06340 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DOAP06340 MRPL20P1-201ENST00000400819 433 ntBASIC20.59■□□□□ 0.89
HLA-DOAP06340 RPSAP43-201ENST00000402237 625 ntBASIC20.59■□□□□ 0.89
HLA-DOAP06340 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.59■□□□□ 0.89
HLA-DOAP06340 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.59■□□□□ 0.89
HLA-DOAP06340 GGTLC5P-201ENST00000617623 998 ntBASIC20.59■□□□□ 0.89
HLA-DOAP06340 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DOAP06340 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
HLA-DOAP06340 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DOAP06340 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DOAP06340 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.59■□□□□ 0.89
HLA-DOAP06340 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.59■□□□□ 0.89
HLA-DOAP06340 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.59■□□□□ 0.89
HLA-DOAP06340 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DOAP06340 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DOAP06340 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
HLA-DOAP06340 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DOAP06340 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
HLA-DOAP06340 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.59■□□□□ 0.89
HLA-DOAP06340 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.59■□□□□ 0.89
HLA-DOAP06340 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DOAP06340 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.58■□□□□ 0.89
HLA-DOAP06340 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DOAP06340 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.58■□□□□ 0.89
HLA-DOAP06340 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.58■□□□□ 0.89
HLA-DOAP06340 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DOAP06340 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
HLA-DOAP06340 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.58■□□□□ 0.89
HLA-DOAP06340 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
HLA-DOAP06340 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
HLA-DOAP06340 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.58■□□□□ 0.89
HLA-DOAP06340 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DOAP06340 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.58■□□□□ 0.89
HLA-DOAP06340 KRT18P2-201ENST00000447938 1258 ntBASIC20.58■□□□□ 0.89
HLA-DOAP06340 HCG4B-203ENST00000450128 991 ntBASIC20.58■□□□□ 0.89
HLA-DOAP06340 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.58■□□□□ 0.89
HLA-DOAP06340 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.58■□□□□ 0.89
HLA-DOAP06340 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.58■□□□□ 0.89
HLA-DOAP06340 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
HLA-DOAP06340 MTDHP5-201ENST00000598980 586 ntBASIC20.58■□□□□ 0.89
HLA-DOAP06340 AC010654.1-201ENST00000615722 808 ntBASIC20.58■□□□□ 0.89
HLA-DOAP06340 LINC01451-201ENST00000623792 534 ntBASIC20.58■□□□□ 0.89
HLA-DOAP06340 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DOAP06340 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
HLA-DOAP06340 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.58■□□□□ 0.88
HLA-DOAP06340 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DOAP06340 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DOAP06340 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DOAP06340 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
HLA-DOAP06340 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
HLA-DOAP06340 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DOAP06340 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DOAP06340 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.57■□□□□ 0.88
HLA-DOAP06340 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DOAP06340 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DOAP06340 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DOAP06340 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DOAP06340 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DOAP06340 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DOAP06340 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DOAP06340 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DOAP06340 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HLA-DOAP06340 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DOAP06340 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DOAP06340 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DOAP06340 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DOAP06340 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DOAP06340 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DOAP06340 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HLA-DOAP06340 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HLA-DOAP06340 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DOAP06340 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.57■□□□□ 0.88
HLA-DOAP06340 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.57■□□□□ 0.88
HLA-DOAP06340 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.57■□□□□ 0.88
HLA-DOAP06340 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.57■□□□□ 0.88
HLA-DOAP06340 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DOAP06340 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DOAP06340 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.57■□□□□ 0.88
HLA-DOAP06340 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HLA-DOAP06340 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.57■□□□□ 0.88
HLA-DOAP06340 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.57■□□□□ 0.88
HLA-DOAP06340 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.57■□□□□ 0.88
HLA-DOAP06340 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.57■□□□□ 0.88
HLA-DOAP06340 AL691403.2-201ENST00000618460 490 ntBASIC20.57■□□□□ 0.88
HLA-DOAP06340 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HLA-DOAP06340 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms