Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
HLA-DRAP01903 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DRAP01903 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DRAP01903 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DRAP01903 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
HLA-DRAP01903 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
HLA-DRAP01903 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DRAP01903 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DRAP01903 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DRAP01903 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HLA-DRAP01903 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.84■□□□□ 0.61
HLA-DRAP01903 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
HLA-DRAP01903 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DRAP01903 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
HLA-DRAP01903 AC046185.3-201ENST00000623228 1824 ntBASIC18.84■□□□□ 0.61
HLA-DRAP01903 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DRAP01903 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DRAP01903 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DRAP01903 AP005117.1-201ENST00000584346 1413 ntBASIC18.83■□□□□ 0.61
HLA-DRAP01903 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DRAP01903 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DRAP01903 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DRAP01903 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.83■□□□□ 0.61
HLA-DRAP01903 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DRAP01903 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DRAP01903 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
HLA-DRAP01903 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DRAP01903 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.83■□□□□ 0.6
HLA-DRAP01903 UNC93B7-201ENST00000509439 705 ntBASIC18.83■□□□□ 0.6
HLA-DRAP01903 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.83■□□□□ 0.6
HLA-DRAP01903 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DRAP01903 IFNL4P1-201ENST00000607083 540 ntBASIC18.83■□□□□ 0.6
HLA-DRAP01903 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DRAP01903 AC009336.1-201ENST00000608941 1553 ntBASIC18.83■□□□□ 0.6
HLA-DRAP01903 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-DRAP01903 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DRAP01903 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DRAP01903 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-DRAP01903 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.83■□□□□ 0.6
HLA-DRAP01903 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DRAP01903 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HLA-DRAP01903 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HLA-DRAP01903 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HLA-DRAP01903 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DRAP01903 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DRAP01903 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
HLA-DRAP01903 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.82■□□□□ 0.6
HLA-DRAP01903 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DRAP01903 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DRAP01903 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DRAP01903 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DRAP01903 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DRAP01903 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HLA-DRAP01903 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DRAP01903 AKR1C7P-201ENST00000305623 895 ntBASIC18.82■□□□□ 0.6
HLA-DRAP01903 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.82■□□□□ 0.6
HLA-DRAP01903 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.82■□□□□ 0.6
HLA-DRAP01903 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.82■□□□□ 0.6
HLA-DRAP01903 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DRAP01903 AC106795.1-205ENST00000512851 1056 ntBASIC18.82■□□□□ 0.6
HLA-DRAP01903 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DRAP01903 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.82■□□□□ 0.6
HLA-DRAP01903 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.82■□□□□ 0.6
HLA-DRAP01903 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.82■□□□□ 0.6
HLA-DRAP01903 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.82■□□□□ 0.6
HLA-DRAP01903 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DRAP01903 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.82■□□□□ 0.6
HLA-DRAP01903 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DRAP01903 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DRAP01903 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.82■□□□□ 0.6
HLA-DRAP01903 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.82■□□□□ 0.6
HLA-DRAP01903 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DRAP01903 AL645608.8-201ENST00000606034 2086 ntBASIC18.81■□□□□ 0.6
HLA-DRAP01903 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-DRAP01903 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HLA-DRAP01903 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.81■□□□□ 0.6
HLA-DRAP01903 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRAP01903 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-DRAP01903 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRAP01903 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HLA-DRAP01903 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRAP01903 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRAP01903 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRAP01903 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.81■□□□□ 0.6
HLA-DRAP01903 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-DRAP01903 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRAP01903 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRAP01903 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRAP01903 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HLA-DRAP01903 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRAP01903 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRAP01903 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRAP01903 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRAP01903 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRAP01903 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRAP01903 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
HLA-DRAP01903 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.81■□□□□ 0.6
HLA-DRAP01903 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DRAP01903 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRAP01903 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms