Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.37■□□□□ 0.53
TRUB2O95900 LYSMD4-203ENST00000378904 2122 ntBASIC18.37■□□□□ 0.53
TRUB2O95900 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRUB2O95900 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB2O95900 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.37■□□□□ 0.53
TRUB2O95900 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRUB2O95900 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRUB2O95900 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.36■□□□□ 0.53
TRUB2O95900 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRUB2O95900 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRUB2O95900 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRUB2O95900 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRUB2O95900 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRUB2O95900 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRUB2O95900 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRUB2O95900 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TRUB2O95900 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TRUB2O95900 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRUB2O95900 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.36■□□□□ 0.53
TRUB2O95900 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.36■□□□□ 0.53
TRUB2O95900 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRUB2O95900 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRUB2O95900 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.36■□□□□ 0.53
TRUB2O95900 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.36■□□□□ 0.53
TRUB2O95900 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.36■□□□□ 0.53
TRUB2O95900 AL049757.1-201ENST00000616842 1596 ntBASIC18.36■□□□□ 0.53
TRUB2O95900 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRUB2O95900 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRUB2O95900 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRUB2O95900 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.35■□□□□ 0.53
TRUB2O95900 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB2O95900 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB2O95900 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
TRUB2O95900 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB2O95900 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TRUB2O95900 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB2O95900 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB2O95900 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TRUB2O95900 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.35■□□□□ 0.53
TRUB2O95900 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.35■□□□□ 0.53
TRUB2O95900 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.35■□□□□ 0.53
TRUB2O95900 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TRUB2O95900 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB2O95900 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.35■□□□□ 0.53
TRUB2O95900 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.35■□□□□ 0.53
TRUB2O95900 ABCD1P5-201ENST00000445663 754 ntBASIC18.35■□□□□ 0.53
TRUB2O95900 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB2O95900 AC002558.1-201ENST00000488906 803 ntBASIC18.35■□□□□ 0.53
TRUB2O95900 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.35■□□□□ 0.53
TRUB2O95900 AC109462.3-201ENST00000573934 613 ntBASIC18.35■□□□□ 0.53
TRUB2O95900 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB2O95900 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TRUB2O95900 AD001527.2-201ENST00000622994 785 ntBASIC18.35■□□□□ 0.53
TRUB2O95900 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.35■□□□□ 0.53
TRUB2O95900 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.35■□□□□ 0.53
TRUB2O95900 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB2O95900 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB2O95900 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRUB2O95900 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB2O95900 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.35■□□□□ 0.53
TRUB2O95900 AC020916.1-201ENST00000587762 1774 ntBASIC18.35■□□□□ 0.53
TRUB2O95900 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.35■□□□□ 0.53
TRUB2O95900 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.34■□□□□ 0.53
TRUB2O95900 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 KRT8P10-201ENST00000450021 1447 ntBASIC18.34■□□□□ 0.53
TRUB2O95900 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.34■□□□□ 0.53
TRUB2O95900 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRUB2O95900 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.34■□□□□ 0.53
TRUB2O95900 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.34■□□□□ 0.53
TRUB2O95900 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.34■□□□□ 0.53
TRUB2O95900 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.34■□□□□ 0.53
TRUB2O95900 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.34■□□□□ 0.53
TRUB2O95900 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.34■□□□□ 0.53
TRUB2O95900 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 AKR1C7P-201ENST00000305623 895 ntBASIC18.34■□□□□ 0.53
TRUB2O95900 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.34■□□□□ 0.53
TRUB2O95900 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.34■□□□□ 0.53
TRUB2O95900 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.34■□□□□ 0.53
TRUB2O95900 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.34■□□□□ 0.53
TRUB2O95900 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.34■□□□□ 0.53
TRUB2O95900 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.34■□□□□ 0.53
TRUB2O95900 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
TRUB2O95900 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.34■□□□□ 0.53
TRUB2O95900 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 AP001269.4-201ENST00000609611 512 ntBASIC18.34■□□□□ 0.53
TRUB2O95900 REXO1L6P-202ENST00000619970 1078 ntBASIC18.34■□□□□ 0.53
TRUB2O95900 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRUB2O95900 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms