Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLSTN1O94985 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.44■□□□□ 0.7
CLSTN1O94985 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CLSTN1O94985 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLSTN1O94985 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC19.44■□□□□ 0.7
CLSTN1O94985 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLSTN1O94985 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.44■□□□□ 0.7
CLSTN1O94985 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLSTN1O94985 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLSTN1O94985 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.44■□□□□ 0.7
CLSTN1O94985 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.44■□□□□ 0.7
CLSTN1O94985 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLSTN1O94985 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLSTN1O94985 AL390719.2-201ENST00000606993 987 ntBASIC19.44■□□□□ 0.7
CLSTN1O94985 AL121672.3-201ENST00000608644 468 ntBASIC19.44■□□□□ 0.7
CLSTN1O94985 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.44■□□□□ 0.7
CLSTN1O94985 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLSTN1O94985 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
CLSTN1O94985 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CLSTN1O94985 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CLSTN1O94985 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC19.44■□□□□ 0.7
CLSTN1O94985 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
CLSTN1O94985 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLSTN1O94985 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.44■□□□□ 0.7
CLSTN1O94985 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLSTN1O94985 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLSTN1O94985 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLSTN1O94985 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.44■□□□□ 0.7
CLSTN1O94985 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.43■□□□□ 0.7
CLSTN1O94985 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLSTN1O94985 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLSTN1O94985 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.43■□□□□ 0.7
CLSTN1O94985 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CLSTN1O94985 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.43■□□□□ 0.7
CLSTN1O94985 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLSTN1O94985 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.43■□□□□ 0.7
CLSTN1O94985 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLSTN1O94985 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLSTN1O94985 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLSTN1O94985 UPK3BP1-201ENST00000428678 509 ntBASIC19.43■□□□□ 0.7
CLSTN1O94985 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.43■□□□□ 0.7
CLSTN1O94985 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.43■□□□□ 0.7
CLSTN1O94985 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.43■□□□□ 0.7
CLSTN1O94985 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.43■□□□□ 0.7
CLSTN1O94985 GUSBP12-201ENST00000513727 720 ntBASIC19.43■□□□□ 0.7
CLSTN1O94985 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.43■□□□□ 0.7
CLSTN1O94985 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLSTN1O94985 AC069148.1-201ENST00000608741 768 ntBASIC19.43■□□□□ 0.7
CLSTN1O94985 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLSTN1O94985 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLSTN1O94985 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLSTN1O94985 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLSTN1O94985 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLSTN1O94985 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLSTN1O94985 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLSTN1O94985 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLSTN1O94985 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLSTN1O94985 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLSTN1O94985 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.43■□□□□ 0.7
CLSTN1O94985 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CLSTN1O94985 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLSTN1O94985 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CLSTN1O94985 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CLSTN1O94985 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLSTN1O94985 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLSTN1O94985 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.42■□□□□ 0.7
CLSTN1O94985 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLSTN1O94985 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CLSTN1O94985 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLSTN1O94985 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.42■□□□□ 0.7
CLSTN1O94985 AC138028.4-201ENST00000564984 1845 ntBASIC19.42■□□□□ 0.7
CLSTN1O94985 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLSTN1O94985 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLSTN1O94985 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLSTN1O94985 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.42■□□□□ 0.7
CLSTN1O94985 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
CLSTN1O94985 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.42■□□□□ 0.7
CLSTN1O94985 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
CLSTN1O94985 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.42■□□□□ 0.7
CLSTN1O94985 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.42■□□□□ 0.7
CLSTN1O94985 AC113404.2-201ENST00000507884 177 ntBASIC19.42■□□□□ 0.7
CLSTN1O94985 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLSTN1O94985 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.42■□□□□ 0.7
CLSTN1O94985 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.42■□□□□ 0.7
CLSTN1O94985 AC124864.1-201ENST00000623408 392 ntBASIC19.42■□□□□ 0.7
CLSTN1O94985 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CLSTN1O94985 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLSTN1O94985 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLSTN1O94985 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.42■□□□□ 0.7
CLSTN1O94985 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CLSTN1O94985 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CLSTN1O94985 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CLSTN1O94985 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.42■□□□□ 0.7
CLSTN1O94985 AC132938.6-201ENST00000623828 1655 ntBASIC19.42■□□□□ 0.7
CLSTN1O94985 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
CLSTN1O94985 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLSTN1O94985 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLSTN1O94985 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CLSTN1O94985 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.42■□□□□ 0.7
CLSTN1O94985 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms