Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.37■□□□□ 0.53
BEST1O76090 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.37■□□□□ 0.53
BEST1O76090 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.37■□□□□ 0.53
BEST1O76090 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
BEST1O76090 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.37■□□□□ 0.53
BEST1O76090 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.37■□□□□ 0.53
BEST1O76090 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.37■□□□□ 0.53
BEST1O76090 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
BEST1O76090 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.37■□□□□ 0.53
BEST1O76090 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
BEST1O76090 AC005332.8-201ENST00000622750 2735 ntBASIC18.37■□□□□ 0.53
BEST1O76090 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST1O76090 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BEST1O76090 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST1O76090 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.37■□□□□ 0.53
BEST1O76090 AL135999.2-201ENST00000622438 1686 ntBASIC18.37■□□□□ 0.53
BEST1O76090 AC097637.2-201ENST00000624096 1997 ntBASIC18.37■□□□□ 0.53
BEST1O76090 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.37■□□□□ 0.53
BEST1O76090 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.36■□□□□ 0.53
BEST1O76090 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST1O76090 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.36■□□□□ 0.53
BEST1O76090 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST1O76090 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST1O76090 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST1O76090 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST1O76090 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST1O76090 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.36■□□□□ 0.53
BEST1O76090 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.36■□□□□ 0.53
BEST1O76090 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.36■□□□□ 0.53
BEST1O76090 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.36■□□□□ 0.53
BEST1O76090 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.36■□□□□ 0.53
BEST1O76090 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
BEST1O76090 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST1O76090 AP002414.3-201ENST00000589352 1468 ntBASIC18.36■□□□□ 0.53
BEST1O76090 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
BEST1O76090 LINC00896-202ENST00000609602 2128 ntBASIC18.36■□□□□ 0.53
BEST1O76090 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.36■□□□□ 0.53
BEST1O76090 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.36■□□□□ 0.53
BEST1O76090 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.36■□□□□ 0.53
BEST1O76090 AC008735.5-201ENST00000623544 497 ntBASIC18.36■□□□□ 0.53
BEST1O76090 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST1O76090 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST1O76090 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.36■□□□□ 0.53
BEST1O76090 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BEST1O76090 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST1O76090 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.35■□□□□ 0.53
BEST1O76090 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BEST1O76090 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.35■□□□□ 0.53
BEST1O76090 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BEST1O76090 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST1O76090 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.35■□□□□ 0.53
BEST1O76090 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.35■□□□□ 0.53
BEST1O76090 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST1O76090 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.35■□□□□ 0.53
BEST1O76090 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BEST1O76090 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.35■□□□□ 0.53
BEST1O76090 LAGE3P1-201ENST00000425356 484 ntBASIC18.35■□□□□ 0.53
BEST1O76090 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST1O76090 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.35■□□□□ 0.53
BEST1O76090 AC139887.3-201ENST00000568585 713 ntBASIC18.35■□□□□ 0.53
BEST1O76090 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.35■□□□□ 0.53
BEST1O76090 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.35■□□□□ 0.53
BEST1O76090 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
BEST1O76090 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
BEST1O76090 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST1O76090 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST1O76090 PP12613-201ENST00000424958 2230 ntBASIC18.35■□□□□ 0.53
BEST1O76090 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
BEST1O76090 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST1O76090 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
BEST1O76090 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST1O76090 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
BEST1O76090 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST1O76090 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST1O76090 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
BEST1O76090 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
BEST1O76090 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
BEST1O76090 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST1O76090 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
BEST1O76090 IL9RP2-201ENST00000423948 1312 ntBASIC18.34■□□□□ 0.53
BEST1O76090 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST1O76090 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST1O76090 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.34■□□□□ 0.53
BEST1O76090 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.34■□□□□ 0.53
BEST1O76090 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.34■□□□□ 0.53
BEST1O76090 AL590627.1-203ENST00000421194 1026 ntBASIC18.34■□□□□ 0.53
BEST1O76090 KRT18P27-201ENST00000427733 1299 ntBASIC18.34■□□□□ 0.53
BEST1O76090 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.34■□□□□ 0.53
BEST1O76090 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.34■□□□□ 0.53
BEST1O76090 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.34■□□□□ 0.53
BEST1O76090 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.34■□□□□ 0.53
BEST1O76090 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.34■□□□□ 0.53
BEST1O76090 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.34■□□□□ 0.53
BEST1O76090 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.34■□□□□ 0.53
BEST1O76090 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.34■□□□□ 0.53
BEST1O76090 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.34■□□□□ 0.53
BEST1O76090 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.34■□□□□ 0.53
BEST1O76090 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.34■□□□□ 0.53
BEST1O76090 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.34■□□□□ 0.53
BEST1O76090 AL589182.2-201ENST00000619332 1049 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms