Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SCN2BO60939 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.65■□□□□ 0.26
SCN2BO60939 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SCN2BO60939 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SCN2BO60939 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
SCN2BO60939 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SCN2BO60939 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SCN2BO60939 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCN2BO60939 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCN2BO60939 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SCN2BO60939 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCN2BO60939 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.64■□□□□ 0.25
SCN2BO60939 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.64■□□□□ 0.25
SCN2BO60939 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCN2BO60939 COX5BP2-201ENST00000392354 334 ntBASIC16.64■□□□□ 0.25
SCN2BO60939 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.64■□□□□ 0.25
SCN2BO60939 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.64■□□□□ 0.25
SCN2BO60939 KRT18P57-201ENST00000443599 1254 ntBASIC16.64■□□□□ 0.25
SCN2BO60939 AL359075.1-203ENST00000462729 1002 ntBASIC16.64■□□□□ 0.25
SCN2BO60939 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.64■□□□□ 0.25
SCN2BO60939 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.64■□□□□ 0.25
SCN2BO60939 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SCN2BO60939 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.64■□□□□ 0.25
SCN2BO60939 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SCN2BO60939 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.64■□□□□ 0.25
SCN2BO60939 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.64■□□□□ 0.25
SCN2BO60939 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCN2BO60939 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCN2BO60939 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.64■□□□□ 0.25
SCN2BO60939 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCN2BO60939 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SCN2BO60939 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCN2BO60939 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCN2BO60939 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCN2BO60939 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCN2BO60939 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCN2BO60939 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.63■□□□□ 0.25
SCN2BO60939 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.63■□□□□ 0.25
SCN2BO60939 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SCN2BO60939 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SCN2BO60939 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.63■□□□□ 0.25
SCN2BO60939 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SCN2BO60939 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 SLC25A1P3-201ENST00000395415 828 ntBASIC16.63■□□□□ 0.25
SCN2BO60939 AK4P3-201ENST00000418260 669 ntBASIC16.63■□□□□ 0.25
SCN2BO60939 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SCN2BO60939 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.63■□□□□ 0.25
SCN2BO60939 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.63■□□□□ 0.25
SCN2BO60939 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.63■□□□□ 0.25
SCN2BO60939 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.63■□□□□ 0.25
SCN2BO60939 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.63■□□□□ 0.25
SCN2BO60939 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SCN2BO60939 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.63■□□□□ 0.25
SCN2BO60939 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.63■□□□□ 0.25
SCN2BO60939 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SCN2BO60939 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SCN2BO60939 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.63■□□□□ 0.25
SCN2BO60939 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.63■□□□□ 0.25
SCN2BO60939 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.63■□□□□ 0.25
SCN2BO60939 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCN2BO60939 Z83836.1-201ENST00000624605 1642 ntBASIC16.63■□□□□ 0.25
SCN2BO60939 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.62■□□□□ 0.25
SCN2BO60939 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCN2BO60939 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCN2BO60939 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCN2BO60939 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SCN2BO60939 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.62■□□□□ 0.25
SCN2BO60939 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.62■□□□□ 0.25
SCN2BO60939 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.62■□□□□ 0.25
SCN2BO60939 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCN2BO60939 AC104076.2-201ENST00000448912 469 ntBASIC16.62■□□□□ 0.25
SCN2BO60939 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.62■□□□□ 0.25
SCN2BO60939 AC002558.1-201ENST00000488906 803 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms