Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
LCMT2O60294 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LCMT2O60294 AL138688.1-201ENST00000624851 1594 ntBASIC16.77■□□□□ 0.27
LCMT2O60294 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.77■□□□□ 0.27
LCMT2O60294 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCMT2O60294 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCMT2O60294 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCMT2O60294 AC141586.5-201ENST00000624546 2050 ntBASIC16.76■□□□□ 0.27
LCMT2O60294 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCMT2O60294 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCMT2O60294 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCMT2O60294 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCMT2O60294 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.76■□□□□ 0.27
LCMT2O60294 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCMT2O60294 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCMT2O60294 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCMT2O60294 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCMT2O60294 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.76■□□□□ 0.27
LCMT2O60294 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCMT2O60294 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCMT2O60294 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
LCMT2O60294 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCMT2O60294 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.76■□□□□ 0.27
LCMT2O60294 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.76■□□□□ 0.27
LCMT2O60294 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.76■□□□□ 0.27
LCMT2O60294 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCMT2O60294 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCMT2O60294 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.76■□□□□ 0.27
LCMT2O60294 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCMT2O60294 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
LCMT2O60294 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCMT2O60294 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
LCMT2O60294 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCMT2O60294 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.76■□□□□ 0.27
LCMT2O60294 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCMT2O60294 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.76■□□□□ 0.27
LCMT2O60294 BCL2-203ENST00000589955 5011 ntBASIC16.76■□□□□ 0.27
LCMT2O60294 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LCMT2O60294 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCMT2O60294 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LCMT2O60294 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LCMT2O60294 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCMT2O60294 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.75■□□□□ 0.27
LCMT2O60294 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.75■□□□□ 0.27
LCMT2O60294 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
LCMT2O60294 AC139713.2-201ENST00000641328 2723 ntBASIC16.75■□□□□ 0.27
LCMT2O60294 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCMT2O60294 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCMT2O60294 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCMT2O60294 MYCLP1-201ENST00000372451 1075 ntBASIC16.75■□□□□ 0.27
LCMT2O60294 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.75■□□□□ 0.27
LCMT2O60294 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.75■□□□□ 0.27
LCMT2O60294 EMBP1-201ENST00000458200 901 ntBASIC16.75■□□□□ 0.27
LCMT2O60294 AC106795.1-205ENST00000512851 1056 ntBASIC16.75■□□□□ 0.27
LCMT2O60294 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.75■□□□□ 0.27
LCMT2O60294 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCMT2O60294 AF238378.1-201ENST00000526806 358 ntBASIC16.75■□□□□ 0.27
LCMT2O60294 KRT126P-201ENST00000549467 1181 ntBASIC16.75■□□□□ 0.27
LCMT2O60294 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.75■□□□□ 0.27
LCMT2O60294 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.75■□□□□ 0.27
LCMT2O60294 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.75■□□□□ 0.27
LCMT2O60294 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.75■□□□□ 0.27
LCMT2O60294 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LCMT2O60294 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LCMT2O60294 REXO1L6P-202ENST00000619970 1078 ntBASIC16.75■□□□□ 0.27
LCMT2O60294 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.75■□□□□ 0.27
LCMT2O60294 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCMT2O60294 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCMT2O60294 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCMT2O60294 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCMT2O60294 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCMT2O60294 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.75■□□□□ 0.27
LCMT2O60294 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCMT2O60294 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.75■□□□□ 0.27
LCMT2O60294 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCMT2O60294 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCMT2O60294 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LCMT2O60294 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LCMT2O60294 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
LCMT2O60294 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LCMT2O60294 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LCMT2O60294 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LCMT2O60294 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LCMT2O60294 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LCMT2O60294 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LCMT2O60294 AL450487.1-201ENST00000426799 995 ntBASIC16.74■□□□□ 0.27
LCMT2O60294 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.74■□□□□ 0.27
LCMT2O60294 STK19B-204ENST00000512515 211 ntBASIC16.74■□□□□ 0.27
LCMT2O60294 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
LCMT2O60294 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.74■□□□□ 0.27
LCMT2O60294 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.74■□□□□ 0.27
LCMT2O60294 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LCMT2O60294 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.74■□□□□ 0.27
LCMT2O60294 MTDHP3-201ENST00000594186 672 ntBASIC16.74■□□□□ 0.27
LCMT2O60294 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.74■□□□□ 0.27
LCMT2O60294 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LCMT2O60294 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LCMT2O60294 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.74■□□□□ 0.27
LCMT2O60294 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LCMT2O60294 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms