Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC148477.8-201ENST00000624298 468 ntBASIC21.74■■□□□ 1.07
SRGAP3O43295 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.74■■□□□ 1.07
SRGAP3O43295 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SRGAP3O43295 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SRGAP3O43295 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRGAP3O43295 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.74■■□□□ 1.07
SRGAP3O43295 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.74■■□□□ 1.07
SRGAP3O43295 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRGAP3O43295 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SRGAP3O43295 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.74■■□□□ 1.07
SRGAP3O43295 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRGAP3O43295 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
SRGAP3O43295 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.74■■□□□ 1.07
SRGAP3O43295 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SRGAP3O43295 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SRGAP3O43295 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRGAP3O43295 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SRGAP3O43295 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.73■■□□□ 1.07
SRGAP3O43295 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SRGAP3O43295 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRGAP3O43295 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRGAP3O43295 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.73■■□□□ 1.07
SRGAP3O43295 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SRGAP3O43295 HCG11-201ENST00000411553 5696 ntBASIC21.73■■□□□ 1.07
SRGAP3O43295 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SRGAP3O43295 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.73■■□□□ 1.07
SRGAP3O43295 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRGAP3O43295 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.73■■□□□ 1.07
SRGAP3O43295 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.73■■□□□ 1.07
SRGAP3O43295 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRGAP3O43295 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
SRGAP3O43295 MTDHP4-201ENST00000600287 670 ntBASIC21.73■■□□□ 1.07
SRGAP3O43295 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SRGAP3O43295 AC025062.2-201ENST00000605477 670 ntBASIC21.73■■□□□ 1.07
SRGAP3O43295 AL022326.1-202ENST00000641533 845 ntBASIC21.73■■□□□ 1.07
SRGAP3O43295 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRGAP3O43295 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.73■■□□□ 1.07
SRGAP3O43295 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SRGAP3O43295 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SRGAP3O43295 FZD10-202ENST00000539839 3282 ntBASIC21.73■■□□□ 1.07
SRGAP3O43295 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SRGAP3O43295 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRGAP3O43295 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRGAP3O43295 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.73■■□□□ 1.07
SRGAP3O43295 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SRGAP3O43295 PCDHB18P-201ENST00000524813 2368 ntBASIC21.73■■□□□ 1.07
SRGAP3O43295 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRGAP3O43295 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.72■■□□□ 1.07
SRGAP3O43295 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.72■■□□□ 1.07
SRGAP3O43295 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.72■■□□□ 1.07
SRGAP3O43295 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SRGAP3O43295 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.72■■□□□ 1.07
SRGAP3O43295 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SRGAP3O43295 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SRGAP3O43295 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SRGAP3O43295 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SRGAP3O43295 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.72■■□□□ 1.07
SRGAP3O43295 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.72■■□□□ 1.07
SRGAP3O43295 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SRGAP3O43295 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SRGAP3O43295 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SRGAP3O43295 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRGAP3O43295 KRT18P67-201ENST00000432816 1264 ntBASIC21.72■■□□□ 1.07
SRGAP3O43295 PRYP5-201ENST00000451909 266 ntBASIC21.72■■□□□ 1.07
SRGAP3O43295 SIGLEC30P-201ENST00000455569 941 ntBASIC21.72■■□□□ 1.07
SRGAP3O43295 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SRGAP3O43295 AC073648.2-201ENST00000510116 352 ntBASIC21.72■■□□□ 1.07
SRGAP3O43295 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.72■■□□□ 1.07
SRGAP3O43295 SLC25A6P4-201ENST00000586535 553 ntBASIC21.72■■□□□ 1.07
SRGAP3O43295 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.72■■□□□ 1.07
SRGAP3O43295 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRGAP3O43295 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRGAP3O43295 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRGAP3O43295 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.72■■□□□ 1.07
SRGAP3O43295 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.72■■□□□ 1.07
SRGAP3O43295 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SRGAP3O43295 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SRGAP3O43295 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
SRGAP3O43295 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SRGAP3O43295 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRGAP3O43295 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.71■■□□□ 1.07
SRGAP3O43295 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRGAP3O43295 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.71■■□□□ 1.07
SRGAP3O43295 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRGAP3O43295 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.71■■□□□ 1.07
SRGAP3O43295 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.71■■□□□ 1.07
SRGAP3O43295 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.71■■□□□ 1.07
SRGAP3O43295 HNRNPDP1-201ENST00000439535 754 ntBASIC21.71■■□□□ 1.07
SRGAP3O43295 FDX1P1-201ENST00000449115 551 ntBASIC21.71■■□□□ 1.07
SRGAP3O43295 AC018712.1-201ENST00000455767 687 ntBASIC21.71■■□□□ 1.07
SRGAP3O43295 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SRGAP3O43295 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SRGAP3O43295 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.71■■□□□ 1.07
SRGAP3O43295 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
SRGAP3O43295 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRGAP3O43295 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRGAP3O43295 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SRGAP3O43295 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.71■■□□□ 1.07
SRGAP3O43295 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.71■■□□□ 1.07
SRGAP3O43295 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms