Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM88BA6NKF7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 MYCLP1-201ENST00000372451 1075 ntBASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 AP006294.1-201ENST00000415407 339 ntBASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 AC104794.3-201ENST00000566840 1248 ntBASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 AL009183.1-201ENST00000603760 355 ntBASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 AC008267.7-201ENST00000624570 1194 ntBASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM88BA6NKF7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 DGCR5-201ENST00000399539 862 ntBASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 NME6-203ENST00000415644 849 ntTSL 2 BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 SPDYE12P-201ENST00000618416 771 ntBASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 AL033527.4-201ENST00000641026 673 ntBASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM88BA6NKF7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 MIR346-201ENST00000362234 95 ntBASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 HMGA1P7-201ENST00000406908 502 ntBASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 AC107918.2-201ENST00000530817 355 ntBASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 AL138828.2-201ENST00000615812 383 ntBASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.14■□□□□ 0.81
TMEM88BA6NKF7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms