Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 AC023274.1-201ENST00000418278 595 ntBASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 AC004832.2-201ENST00000426397 482 ntBASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV19A0A0A6YYK7 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.08■□□□□ 0.49
TRAV19A0A0A6YYK7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV19A0A0A6YYK7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV19A0A0A6YYK7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.08■□□□□ 0.49
TRAV19A0A0A6YYK7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV19A0A0A6YYK7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV19A0A0A6YYK7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV19A0A0A6YYK7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV19A0A0A6YYK7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.08■□□□□ 0.49
TRAV19A0A0A6YYK7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV19A0A0A6YYK7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV19A0A0A6YYK7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 GPX1P2-201ENST00000429271 606 ntBASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 PRSS29P-201ENST00000440800 595 ntBASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 VN2R19P-201ENST00000442399 1052 ntBASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 AC004790.2-201ENST00000623588 572 ntBASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 AC026471.1-201ENST00000564629 3026 ntBASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV19A0A0A6YYK7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 AP002414.1-201ENST00000391405 1147 ntBASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 PTCHD3P3-201ENST00000403073 906 ntBASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 BICD1-207ENST00000551848 1962 ntBASIC18.07■□□□□ 0.48
TRAV19A0A0A6YYK7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms