Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 NEK4P2-201ENST00000580004 1012 ntBASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 AL138966.2-201ENST00000621997 464 ntBASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 AC068587.9-201ENST00000641814 219 ntBASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
R3HCC1Q9Y3T6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 AC106886.4-201ENST00000623557 2502 ntBASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
R3HCC1Q9Y3T6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
R3HCC1Q9Y3T6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 LINC01126-201ENST00000623515 1646 ntBASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 AC073508.3-201ENST00000619697 1419 ntBASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
R3HCC1Q9Y3T6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 AC034236.2-201ENST00000606662 1610 ntBASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 MIR564-202ENST00000385049 94 ntBASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 AK4P3-201ENST00000418260 669 ntBASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 LINC01238-205ENST00000567549 1107 ntBASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms