Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 AC027307.3-201ENST00000594262 1100 ntBASIC16.6■□□□□ 0.25
LHX6Q9UPM6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 AL451064.1-201ENST00000607718 471 ntBASIC16.6■□□□□ 0.25
LHX6Q9UPM6 AC073592.5-201ENST00000624854 528 ntBASIC16.6■□□□□ 0.25
LHX6Q9UPM6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX6Q9UPM6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 MIR661-201ENST00000384842 89 ntBASIC16.59■□□□□ 0.25
LHX6Q9UPM6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 AC104629.1-201ENST00000494226 508 ntBASIC16.59■□□□□ 0.25
LHX6Q9UPM6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 AC022762.2-201ENST00000600308 1353 ntBASIC16.59■□□□□ 0.25
LHX6Q9UPM6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX6Q9UPM6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LHX6Q9UPM6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LHX6Q9UPM6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.58■□□□□ 0.25
LHX6Q9UPM6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
LHX6Q9UPM6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LHX6Q9UPM6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms